| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1420 |
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| Symbol | |
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| ID | 3963194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1526812 |
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| End bp | 1528497 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916237 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_522684 |
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| Protein GI | 89900213 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTGC CTGAAGATGA CTTGTCGGCC TCGCAAGCGC TGGTGATTGA CAGCAACCCG
ACCTCACGCT CCATTTTGGT GTCACAGTTG CGAGACCTGG GCCTGGGCAA CATCGCGCAA
TGCGCCCGAC TGGCCGATGC TCGCCGCCAA CTTGAGTACC GCTCGTTTGA TGTTGTGTTG
TGTGAGCAGC ATTTTGCCAA CGAAGCCTCG TCTGGCCAAG ACCTGCTCGA TGACTTGCGA
CGCAACCAAT TACTGCCGTT TTCAACTGTT TTCATCATGG TCACCGCCGA GGCCACCTAC
GCCAAGGTAG CCGAGGCCGC CGAGTCGGCG CTGGATGGCT ATTTGCTCAA GCCACATAAG
GCCGCCCAGT TGGGGGATCG TCTGCGCCAG GCGCGCATTC GCAAAATTTC CTTGCAGGAG
ATATTCTCCG CCGTCGAAGC AGAAGATTTT GAACACGCTG CCCAGCTCTG TCAGCAGCGC
TTTGAAACGA GAGGCCTGTT TTGGCTCTAT GCCGCCCGCG TCGGCGCCGA GTTGTTGCTG
CGCACCGGCC AATACGCCCA GGCCCAGACC ATGTACGAAG CGGTGGTGCA AGCCAAAACC
CTGCCCTGGG CCAAACTCGG CGTGGCCCGC TCTCTGCTGG ACGCAGGCCA AACCGCCCGC
GCCGCCAGCA CGCTGGAGAA CCTGATCAGC GAAGACCCCA GCTACAGCGA TGCCTATGAC
GTGCTGGGCC GCGCCCAGTT TGAACTCGGC AAGTTTGATC AGGCGCTGGC CACCTACAAA
ATGGCCGCCA ACCTGACACC CGCGTCCATC AGTCGTCTGC AAAATCTGGG CATGATGACT
TACTACGCAG GGGACCGGCA AGAGGCCGAA AAGATACTCG ACCGCACCGC CCGGCTGGGG
CTGGACTCGA AAATGTTCGA CTGCCAGACA CTGGTACTGC TGGCCTTCAC CCGCCTCGAG
AATGGCGACG GCAAAGGTCT GCAGCGCTGT CGCGACGACT TTGCCCGCCT GATCGAAAAA
GACCCAAAAA ACGAACGCCA CCAACGCTTG TCTGGCATTG TCGAGGTGCT GTCGTCGATT
CAGCAAGGTC AGTTTGCGCA GGCGGTCGAT GCCGTGCGCA CCATGGCCCT CACCATCAGT
TCGCCCAACT TCGATTTTGA AGCCGCCTCG AATCAGTTGG CCTTGCTGGC GCAATTGGCA
AACAAAGCCA TCCAGCTCGA CGAAGTGGCG TCTTTTGTCG ACACACTGGC GCTGCGTTTT
TGCACCAACA ACACCCTCAG CGAACTGCTC GCCGGTGCCG CGGCCATCCA CCCGCCTTAT
GCTGAGCGCA TTCGCTCAGC CCACAGCCAG ATTCTGAAAA TCACCGAATA CGCCGTGTCC
CTCAGCATGA GCGGGGACCC GCAGGCGTCG GTCAAGCACC TCCTGTTTCA CGGCAATGCC
ACTCTCAATG CCAAGTTGAT CGAAACCGCT TATCTGGTGC TGCATCGCTA TGTCGACAAA
ATTGCCGACG CGCCCAGACT GAGCGAAGCC GTGAATGACT TACGCACACG CTTTGCCACC
CAGAGCAATC GGTCGGCGTT CGGGGAACAA AGGCGCCAAC CCGGTGGTTT GACCTTGCGC
GGCGGCGCTG CGCCCGCCAA AGCAGCCAGC GCCGTTTCGC CCGGCGGAGT CAAAGCGGAT
CAATAG
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| Protein sequence | MALPEDDLSA SQALVIDSNP TSRSILVSQL RDLGLGNIAQ CARLADARRQ LEYRSFDVVL
CEQHFANEAS SGQDLLDDLR RNQLLPFSTV FIMVTAEATY AKVAEAAESA LDGYLLKPHK
AAQLGDRLRQ ARIRKISLQE IFSAVEAEDF EHAAQLCQQR FETRGLFWLY AARVGAELLL
RTGQYAQAQT MYEAVVQAKT LPWAKLGVAR SLLDAGQTAR AASTLENLIS EDPSYSDAYD
VLGRAQFELG KFDQALATYK MAANLTPASI SRLQNLGMMT YYAGDRQEAE KILDRTARLG
LDSKMFDCQT LVLLAFTRLE NGDGKGLQRC RDDFARLIEK DPKNERHQRL SGIVEVLSSI
QQGQFAQAVD AVRTMALTIS SPNFDFEAAS NQLALLAQLA NKAIQLDEVA SFVDTLALRF
CTNNTLSELL AGAAAIHPPY AERIRSAHSQ ILKITEYAVS LSMSGDPQAS VKHLLFHGNA
TLNAKLIETA YLVLHRYVDK IADAPRLSEA VNDLRTRFAT QSNRSAFGEQ RRQPGGLTLR
GGAAPAKAAS AVSPGGVKAD Q
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