| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1385 |
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| Symbol | |
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| ID | 3960209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1498039 |
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| End bp | 1499397 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916201 |
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| Product | peptidase U32 |
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| Protein accession | YP_522649 |
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| Protein GI | 89900178 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.610074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTGA AAAAACCTGA GCTGCTGGCG CCGGCAGGGT CGCTGACCAT GCTGGAGACT
GCTTTTGCCT TTGGCGCCAC GGCCATCTAC GCGGGCCAGC CGCGCTACAG CTTGCGCGTG
CGCAACAATG ACTTTGGCGC CATCGAGGTG CTGCAGCAGG GCATCGAGCG GGCGCATGGG
CTGGGCAACA AGTTCTATCT GGTGTCCAAC ATCTTCCCGC ATGGCAACAA AATCAAGAGC
TATGTGCAAA ACATGGCGCC GGTGATTGCG CTCAAGCCCG ACGCCATGAT CATGTCCGAC
CCCGGTCTGA TCATGATGGT GCGCGAGACC TGGCCCGAGA TGGAAATTCA CCTCTCGGTG
CAGGCCAACA CGGTCAATGC CGCCGCCGTG CGCTTCTGGA AGAGCGTCGG TGTCAGCCGG
GTGATCCTGT CGCGTGAGTT ATCGCTGGAT CAGGTGGAGC AAATCCGCCA GGACTGCCCG
GACACCGAGC TTGAAGTGTT TGTGCACGGG GCGCTGTGTA TTGCTTATTC GGGGCGCTGT
CTGTTGTCGG GTTACTTCAA CCACCGCGAT GCCAACCAGG GCAGTTGCAC CAACTCCTGC
CGCTGGGATT ACAAAACCTT GCCCGGCGTG GTCGATGCCT GCGGCGACAT TCTGGCACCC
CAGGCTGCTA CGGAGCGTGA GCAGGAGCAG GCCCAACGCG GCGCGGCCCC GGATCAGGTT
TACGTGATCG AAGAAGGCCA GCGCCCCGGC AGCTACATGC CGATTGAAGA AGACGAGCAC
GGCACCTACG TCATGAACTC CAAGGACTTG CGCGCCATCG AGCATGTCAA GCGCCTGGTC
GAGATCGGCG TCGATTCGCT CAAGATCGAG GGCCGCACCA AAAGCCCGTA TTACGTGGCG
CGCACGGTGC AGAGTTATGC CCGGGCGATT GACGACGCCG TGGCGGGGCG CGAGCTGGAC
CCCGCCTTGC TCGGTCAGCT TGAAGGGCTG GCCAACCGGG GTTACACCTC GGGCTTTTTC
CAGCGCCACA CGCCGGAGTC CACGCAAAAT TACCTGCGCG GTTATTCCGA GTCGGGACGC
AGCCTGTATG TGGGCGATGT GGCGCTGTTT GACCAGGCGC GTGGGCTGGC GCAAGTGATT
GTGAAGAACC GTTTTGCGGT GGGTGACTGG CTGGAGATCA TCCACCCGGG CGGCAACTCT
GATCTGCAAC TCGAGCGCAT GGAGAATGCC GACGGGCAAG CCGTGACGGT GGCACCCGGC
AGTGGCCACG TCGTCTGGTT GCCCTTGCCC GCGCATGCGG TCGGCGCCTT CGTGGCGCGC
TACGTGGCGG CGCCGGAATC TGAAGCCGCG AGCGCCTGA
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| Protein sequence | MSLKKPELLA PAGSLTMLET AFAFGATAIY AGQPRYSLRV RNNDFGAIEV LQQGIERAHG
LGNKFYLVSN IFPHGNKIKS YVQNMAPVIA LKPDAMIMSD PGLIMMVRET WPEMEIHLSV
QANTVNAAAV RFWKSVGVSR VILSRELSLD QVEQIRQDCP DTELEVFVHG ALCIAYSGRC
LLSGYFNHRD ANQGSCTNSC RWDYKTLPGV VDACGDILAP QAATEREQEQ AQRGAAPDQV
YVIEEGQRPG SYMPIEEDEH GTYVMNSKDL RAIEHVKRLV EIGVDSLKIE GRTKSPYYVA
RTVQSYARAI DDAVAGRELD PALLGQLEGL ANRGYTSGFF QRHTPESTQN YLRGYSESGR
SLYVGDVALF DQARGLAQVI VKNRFAVGDW LEIIHPGGNS DLQLERMENA DGQAVTVAPG
SGHVVWLPLP AHAVGAFVAR YVAAPESEAA SA
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