| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1380 |
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| Symbol | pyrB |
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| ID | 3960204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1491688 |
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| End bp | 1492650 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916197 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_522645 |
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| Protein GI | 89900174 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.591528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTTACA AACGCAACCT CCAGCTCAAT AAAAATGGCG AGCTCATTCA CCTGCTCTCG
ACCGAGGGCT TGCCCAAGAG CATCCTGACT CAGGTGCTCG ACACCGCCAC CAATTTCGTC
AGCATCGGTG ACCGCGAGGT CAAGAAAGTG CCGCTGCTGC GCGGCAAGAG TGTGTTCAAC
CTGTTTTTTG AGAACTCGAC GCGCACCCGC ACCACCTTCG AGATTGCTGC CAAGCGGCTC
AGCGCCGACG TCATCAACCT CGATATTGCC AAGTCATCGG CCGTCAAGGG CGAGACACTG
CTCGACACCA TTGCCAACCT GAGCGCCATG GCCGCCGACC TGTTTGTGGT GCGCCACAGC
GAATCGGGCG CGCCCTACCT GATTGCGCAA CACGTGGCGC CGCATGTGCA TGTGATCAAT
GCCGGTGACG GGCGCCATGC GCACCCGACG CAAGGCTTGC TCGACATGTA CACCATCCGC
CACTACAAAA AAGATTTTTC CAATCTCACG GTGGCCATCG TCGGCGACGT GTTGCACTCG
CGCGTGGCGC GCTCCGACAT TCACGCCCTC ACCACGCTGG GCTGCCCTGA AGTGCGGGTG
GTGGGGCCCA AGACCATCGT GCCGGGCGAC ATGGCGCCCA TGGGTGTGCG CGTTTGCCAC
ACACTCGAAG AAGGCATCAA GGGCGCTGAC GTGATCATCA TGCTGCGTCT GCAAAACGAG
CGCATGAGCG GCGCGCTGCT GCCCTCCAGC CAGGAGTTTT TCAAGAGCTT TGGCTTGACG
CCGGAGAAAC TGCAACTGGC CCGGCCCGAT GCCATCGTGA TGCACCCGGG GCCGATCAAC
CGGGGGGTGG AGATCGACTC GGCGGTGGCC GATGGCACAC ACAGCGTGAT CCTGCCGCAG
GTCACTTTTG GTATTGCCGT ACGCATGGCC GCGATGAGCA TCGTGGCAGG GAATGAGGCC
TGA
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| Protein sequence | MLYKRNLQLN KNGELIHLLS TEGLPKSILT QVLDTATNFV SIGDREVKKV PLLRGKSVFN
LFFENSTRTR TTFEIAAKRL SADVINLDIA KSSAVKGETL LDTIANLSAM AADLFVVRHS
ESGAPYLIAQ HVAPHVHVIN AGDGRHAHPT QGLLDMYTIR HYKKDFSNLT VAIVGDVLHS
RVARSDIHAL TTLGCPEVRV VGPKTIVPGD MAPMGVRVCH TLEEGIKGAD VIIMLRLQNE
RMSGALLPSS QEFFKSFGLT PEKLQLARPD AIVMHPGPIN RGVEIDSAVA DGTHSVILPQ
VTFGIAVRMA AMSIVAGNEA
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