| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1376 |
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| Symbol | |
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| ID | 3960200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1488606 |
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| End bp | 1490084 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916193 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_522641 |
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| Protein GI | 89900170 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC AATTCGATTC TGGTTTGATG TGGTTCCGCC GTGACCTGCG GGTGATCGAC
AACGCCGCCT TGTGCCTGGC GCTGGCGGCC TGCCGCCAGC TTCACTGCGT TTTTGTCTTT
GACCGTGACA TCCTCGACAC CCTGCCACGC GCTGACCGCC GGGTCGAATT TATCCGGGCG
TCCTTGTGTG AACTGGACGT GGCATTGGGC CAGCTCAGCG GCAAGGCGGG TGTCGGCCTG
ATCGTGCGCC ACGCCGTGGC CAGCGAGGAA ATAGTCACAC TGGCCAAAAC ACTGCAGGTG
CAGGCGGTTT TTGCGGCCCA TGACTACGAG CCGCAAGCGC TGGCACGCGA TGCCCGGGTA
CGGGGTGCCC TGGCGCACGT CGGTATTGTC CTGCACACCT GCAAGGATCA TGTGATTTTT
GAAAATCGCG AGATTCTGAG CAAAACCGGC ACACCCTATG GCGTTTTCAC ACCCTACAAG
AACACCTGGC TGGCAACGGT AACACCGCAG CATTTGCGCC ACCATGACGC CACACCGGTT
GCGCAGGCGC TGGTCCCCCG ACCTGAGGGC CTGCAACAAC CGGTGCCGAC ACTGGCCGCT
ATCGGCTTTG AAAAAACCAA CCTGAGTCAA CTCAAGATTC CAACCGGGGC GTCGGGCGGC
GCCCGGCTGT TTGAAGATTT TTTTGAACGT ATGGACAGTT ACCATGAAAC AAGGGACTTG
CCAGCGGTCA AGGGTCCGAG CTATCTTGGT GTGCACCTGC GCTTTGGCAC GGTGTCGGTT
CGCCAACTGG CTGCCACCGC CTTGCAACGG CAGATTCAGG GTAGCCGAGG CGCGGCGGTC
TGGCTGGGAG AATTGATCTG GCGGGATTTT TATTTCTCGA TTCTGGCTAA TTTTCCGCAC
GTGGCACAAG GCGCCTTCAA GCCCGAGTAC GACGCGATCA AATGGGAACA CGGCAAGCAC
GCTGATTCCC TGTTCCAAGC CTGGTGCGAG GGACGAACCG GTTATCCGCT GGTGGATGCT
GCCATGGCCC AGATCAACCA GACTGGCTAC ATGCACAATC GCCTGCGCAT GGTGGCGGGC
AGCTTTTTGG TGAAAGACCT CGGGATTGAC TGGCGCTGGG GCGAAAAATA CTTTGCCAGG
CACCTCAATG ACTTTGACCT GGCGGCCAAC AACGGTGGCT GGCAGTGGGT CAGTTCCAGC
GGTTGCGATG CGCAGCCGTA CTTCAGGATT TTCAATCCGG TGACCCAAAG TGAAAAGTTT
GATGCCGACG GTAAATTCAT CCGCCGCTAC TTGCCACAAC TGGCCCGACT ACCGAGCAAA
GTCATTCACG CGCCGTGGAC CGCCCAAGCG CTTGAGCTGC AAATGGAGGG CGTGACGCTG
GGCCAAAACT ACCCCGCGCC GATCGTGGCG CACGCTGCGG CACGTGCGCT GACCTTACAG
CGCTACGCTG TCGTCAAAAA GCACCAAGCT GCCACCTGA
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| Protein sequence | MNKQFDSGLM WFRRDLRVID NAALCLALAA CRQLHCVFVF DRDILDTLPR ADRRVEFIRA
SLCELDVALG QLSGKAGVGL IVRHAVASEE IVTLAKTLQV QAVFAAHDYE PQALARDARV
RGALAHVGIV LHTCKDHVIF ENREILSKTG TPYGVFTPYK NTWLATVTPQ HLRHHDATPV
AQALVPRPEG LQQPVPTLAA IGFEKTNLSQ LKIPTGASGG ARLFEDFFER MDSYHETRDL
PAVKGPSYLG VHLRFGTVSV RQLAATALQR QIQGSRGAAV WLGELIWRDF YFSILANFPH
VAQGAFKPEY DAIKWEHGKH ADSLFQAWCE GRTGYPLVDA AMAQINQTGY MHNRLRMVAG
SFLVKDLGID WRWGEKYFAR HLNDFDLAAN NGGWQWVSSS GCDAQPYFRI FNPVTQSEKF
DADGKFIRRY LPQLARLPSK VIHAPWTAQA LELQMEGVTL GQNYPAPIVA HAAARALTLQ
RYAVVKKHQA AT
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