| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1367 |
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| Symbol | |
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| ID | 3960521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1472554 |
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| End bp | 1476423 |
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| Gene Length | 3870 bp |
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| Protein Length | 1289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916184 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_522632 |
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| Protein GI | 89900161 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACACG GTTTCAAGGA AAGCGACTTT CAGAACGGCA TTTTCATCCC CTACCTGACC
GCGCCCCAAC CAGGTGGACT GGACTGGATA CAGGGAAAGC CCACCGACAT CGACGCCGCG
CGCTGGATCG TGCCGGGGGA TTTGCTGCAC TTTCTGCGCG ACGGCTGCCC GCTGAATGTT
GCTGCCTTTG CCAAGGCCAG CAAGGGGTAC GGCTCCGACA TGGATTTTTT GCAAGCCTTT
CTGCTTGATG CGTTGTTGCC CAAGATCGAG GCCAAGGCGA ATGCCGCTTT TGTGCTGCGC
GAGAGCATCA CCTTTGCCGG GCAGTCTTTC GTGTTGTGGA ACGAAGCGCC GCGCACCGGG
GCAGATTCCG GCGCGGCGGA CCTGTTCAAG AAGAACTACC TGCGCGTGAT CCCCGAAGCG
CCGTTCGAGC GCGTCTTTCC GCACAGCAAC AAGCGCATCA AGCGCCGCCC CGACGTGGTG
TTTTTCGTCA ATGGGCTGTA CCTCTCCTAT GCCGAGCTGA AAACCGCGCA GACCGGGCAG
ACCGCCGCCG GGCACGGGCG CAAGAAGATT GCCCACGACT GCATCGAGGC GGGCAGCGCG
GCCTTGCAGG AGGCGCGCGA GCGCTACGCG GCACAGGGCG GCAAGTGGCC GGGCTTTCGC
CACCGCGATC TGCGCGAAAA GGAGCGCCAG GAAATCCGTC AGTCGATATG CCTGTACGAA
AAAGCCGCGC ACATCAGTTG CGTGGACATG GGCGCGATGA TGATCCTGTC GGACATCGAA
TGGCTGCTGC CGGAAATCGA CGACGCCATC GAGGCCAACG ATACCCAGGC GCTGGTGGAG
ACGTTGCCGG GCAAGGTGAT GGACGCCTTC ATGCGCGCCG CCGAGATGCG CGACAAGCCT
GCCTCGGAGG CGCTGGCCGA CCATCTGGCC TCGTTTTTTT CCGCTGCGGA TGGCGTGGAT
CGGGAGATCT ATTTCTTCAA CCAGATACGC CCCAGCCGCA CCACCACCGG CACCGAGATT
CTGCGCCCCC GCCCGGCGCA GCGGGCGATG CTGCATCAGT CGGTCAAGCG GGTGTGCGCG
CTGTACGCCG ACGAGAGTAA ATCCAAGATC AACGAGCCGG ACATCCGCGC GGCGCTCGCA
GAATCGTTGC CCGACCTCGA CCCGAAAAAG GTTAACGAGA TCGTGGCCAA AACCCTGCTG
CACCGCAACG GGCAGGAGTC GCATTCCATC CTGTTACAAG GCGCTGCCGG GCTGGGAAAA
ACCAATGTGA TTGTCTGGCT GGCGCAGGCG CTTTCGGACA TGCCCGACCC GCGCAGCAAG
GCGGCATCAC CGCTGTTCGA TTTGTGCATA TTGCTCACTG ACCGCACCGA GCTGCGCCAG
AACGTGGCGG AAGAGGCGGC GCGCCTGGGG GCGACCAAGA ACATCGTCGC CGAGGCGGAA
ACCTTCAAGG GGCTGTACGA CAGCCTGCAA GACGGAGCGC GGGTGGTAGT GGTGAATATC
CAGAAATTCC CCTCGATCAA GCGGCTGGCG CAGGACGATG CAGCGCTGTC CAAGCTTCTG
ACTGGCAAGC GGGTAGCGTT CATCATCGAC GAGGTGCATC GCTCGCAAGG CGGTGTATTG
CACGATGCGA CTATCGAAAT TTTCGACGAG TGGGGCAGCC TCCGTCCGGC GGGCGCCAAG
CGCAATCTCA TCATTGGCCT GACGGCCACC CCGCGCGACG AGGTGCTTGC TCGCTTCGGC
GAATGGCGTG CGCCACGGGC GGCGGGGGAT GACATCCGCT GGGCGCCGTA TTTCGCCTAC
ACCATGACGC AGGCGATTCG CGAGAGGGTG ATTCTGAACC CGATACAGAA CGTGATCCGC
TTCGAGGATC ATTTGCAGTA CCGGATTACC GACACGGTGC AGAAGCTGAG GCCCGGCGAT
GAGTTGCGCC CGCCGAGTTC GGACGAGATT TACCAGAACC CAGACCGGCA AAGCATGGTC
GCCAAAAATG CGGCATTGGT GTTTGTGGCC AAGACCATGA TGGCGATACG CCCGCCGGGA
GGGCGCGCCC TGGGCGATGG CAAGGCGATG TTCGCGGCGC ATTCAATCAA GGCGGCGATT
GCCTATCAAC CGCTGCTGCG CGCTGAGCTG GACAAGCTGG CGGACGATCC GCGCTTCGTC
GAGCACGCGC AGGCAATCAA GGCCACGCCC GTGCTGCTGC TTTATACCGA CAAGCAGGGG
GAAGCCTCAT GCGCTTCCCT CAACGGCGGC AGGAATCAGG ATGCCATCAT CGACGAATTC
CGCCGCAAGG GTGAAGGGGC GAAACAGGGC GCGAAGGTGC ATAACGCGCT CATCGTGGTG
GTGGACAAGC TGCTGACCGG CTTTGACGAA CCGACGCTGC ACACGCTGTT CATCGACCGA
GGCATGGACG ATGTGCTGCT GTTCCAGGCC GCCTGCCGCG TGAACCGCTG GCGCAAGTGG
AAAAACGATT GCCTGCTGGT GGATTTCTCC CATGACGGCG TAGTCTCGAA AAACTTGCCC
AAGGTGTTTG CCAAGTATGG CGGCCTCACG GTTTCGAGCC TGGACGCGAT GGAGTTGAAG
GACAAAATGG ACGCGGCGTT CAAGGTTTTT TTCGATGAAA AGGACATCAA TGCCCATTGG
CGCGCCTGGA AGGCCACTTC ATCCGGCGGT AAGGATCAGG AATCGGCAAC CGGCCTTTCG
GATTTTCTGG ATGGGCTGGT GAAGAACGAA GTGGAGCGCG CCAAGACCAT CAGAAAGGCC
GGTTCAGCCT GGTTGTCCAG CCGCGAGCGG TTATCCGGCA TTCTCGACTT CACCAAACCG
GCACTGGCCA AGCACGCCGA CGAGAAGCGG GCAGCGTTCG CCGAACAGGT GGTTAAGCAT
CTCGCCAGCA AGCTGCGTGA CGATGATGAT CGCGTCGGCG CGGTGTTCGA CATCGACCTG
GTGGAGGATG CGGTCGGTTG GGGCCTGGAT GAACTCCCGG AGGCCGAGGA GAAAAAGAAA
AAACCCAAGG GCGAGGCGGG CTTGCCGCAT TCCGTGGGCG GGTTAATGTC CTCGCTGGAC
GCCATTGAAT TGCTCGCCGC CTTGCAGCTC ACCGAACAAC AAAAGCTCCA GCTCATCGAA
AAGCTAAAGT CGTTTCTGAT TGCGTTGTTT CAGGTCATCG ACAACGAAGG CGCGAAGCGC
AATAACGACA TCCACCGCAA GATGATTCAG GCGATGGCGA ACGAGGGCGC GGATTTTCCA
TGGGATGAGC GCTTTACCAA ATTCAAGGGG CTGCTGGATA CCACGGCCAC CAATTTGAAA
ATACTCACCC ACCCTGACCG CAAAGCGCTG CTGCTGCCAC TGTTGAAGCG GCCTGAACTG
ATGATGGCAG ACTATGAAGA GTGGGTTGTG TCGGAGGGGG CTTCAATTGC GATGGGCGAC
CAGCCTGTTG AACGCGAAGT AGTCAAAACA AGTGCATCGA AAGTGCTCGA CGAGCTCAGA
AGCATCAAGC AGAGATCGGC TGAGTTTCTT CGGCTACAGC TCGGAGTCGA TTCGAAGTGG
AGCCAAATCA ATGACGCCTT TTGGTCTGTC ATTGTGAAAA GTGACCGAAG GGTGCTTTGC
CTTGCGGATT TGAGCCCCAT TGCGGACGCT GGCGGGTGGC AGCAATCGGA GCTATTGGCG
GTGCTGGGTT TGCTTGGAGC GCCCAAGGCC GCACTTTTGC GTATGGAATT GCGTGCACCA
GACGGCACTG AAGTTCCGGC AGAGGAGGTG TCGCAAAAGC TGGCTGCGTG GTGGAAGAGT
AAGACCATGA CGGATGCCGA ATGGAAAGCG TGGGCATCGC AATATGCGGT GTCATGGTCA
CCCGTGGTAG CGCAAGGAGC AGCCAAATGA
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| Protein sequence | MAHGFKESDF QNGIFIPYLT APQPGGLDWI QGKPTDIDAA RWIVPGDLLH FLRDGCPLNV
AAFAKASKGY GSDMDFLQAF LLDALLPKIE AKANAAFVLR ESITFAGQSF VLWNEAPRTG
ADSGAADLFK KNYLRVIPEA PFERVFPHSN KRIKRRPDVV FFVNGLYLSY AELKTAQTGQ
TAAGHGRKKI AHDCIEAGSA ALQEARERYA AQGGKWPGFR HRDLREKERQ EIRQSICLYE
KAAHISCVDM GAMMILSDIE WLLPEIDDAI EANDTQALVE TLPGKVMDAF MRAAEMRDKP
ASEALADHLA SFFSAADGVD REIYFFNQIR PSRTTTGTEI LRPRPAQRAM LHQSVKRVCA
LYADESKSKI NEPDIRAALA ESLPDLDPKK VNEIVAKTLL HRNGQESHSI LLQGAAGLGK
TNVIVWLAQA LSDMPDPRSK AASPLFDLCI LLTDRTELRQ NVAEEAARLG ATKNIVAEAE
TFKGLYDSLQ DGARVVVVNI QKFPSIKRLA QDDAALSKLL TGKRVAFIID EVHRSQGGVL
HDATIEIFDE WGSLRPAGAK RNLIIGLTAT PRDEVLARFG EWRAPRAAGD DIRWAPYFAY
TMTQAIRERV ILNPIQNVIR FEDHLQYRIT DTVQKLRPGD ELRPPSSDEI YQNPDRQSMV
AKNAALVFVA KTMMAIRPPG GRALGDGKAM FAAHSIKAAI AYQPLLRAEL DKLADDPRFV
EHAQAIKATP VLLLYTDKQG EASCASLNGG RNQDAIIDEF RRKGEGAKQG AKVHNALIVV
VDKLLTGFDE PTLHTLFIDR GMDDVLLFQA ACRVNRWRKW KNDCLLVDFS HDGVVSKNLP
KVFAKYGGLT VSSLDAMELK DKMDAAFKVF FDEKDINAHW RAWKATSSGG KDQESATGLS
DFLDGLVKNE VERAKTIRKA GSAWLSSRER LSGILDFTKP ALAKHADEKR AAFAEQVVKH
LASKLRDDDD RVGAVFDIDL VEDAVGWGLD ELPEAEEKKK KPKGEAGLPH SVGGLMSSLD
AIELLAALQL TEQQKLQLIE KLKSFLIALF QVIDNEGAKR NNDIHRKMIQ AMANEGADFP
WDERFTKFKG LLDTTATNLK ILTHPDRKAL LLPLLKRPEL MMADYEEWVV SEGASIAMGD
QPVEREVVKT SASKVLDELR SIKQRSAEFL RLQLGVDSKW SQINDAFWSV IVKSDRRVLC
LADLSPIADA GGWQQSELLA VLGLLGAPKA ALLRMELRAP DGTEVPAEEV SQKLAAWWKS
KTMTDAEWKA WASQYAVSWS PVVAQGAAK
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