| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1365 |
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| Symbol | |
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| ID | 3960519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1469159 |
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| End bp | 1471252 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916182 |
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| Product | N-6 DNA methylase |
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| Protein accession | YP_522630 |
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| Protein GI | 89900159 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.518057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAA AAATTGGCGC GGGACTGCTC GAATATGCCG GAAAAATCTG GGATACCGCC
GACACGCTGC GCGGCGCGGG GATCAAGGAA AGCGAATGGC CTACTTACAT GATGCCGTTC
TTCGCGCTGA TGATGCTCGA ATCGCGCCTG CGCCGTTTCA AGCAAGAGCG CATTGCCGAG
TATGAAGAGG AAACTGGCGC GGCCTTTGAT CCCGAGGACG CCACCCACGC CAAATGGCTG
GACGATACCG CCAAAGCCGT CGGCAAGGGC TACCACAAAG ACCTGCTGCT TCACGACAAG
GGCCTGCGCG AAACCTGTCT GGTGCCGGGC GGCAACTTTC TCAACCGCCT GCTATCGCAC
CTGAACTCAT ACGACCCTGA CACCAAGAAG CTGCTGGGCA TCGACTACGC GCAAGGATCG
GCCAAGTTTC TCGACATGCA GGGCAAGGCA TCCGACCTCA ACGCCCGCGA CAACAACCCG
CTCTATCCCT TCGCGCAGAA GTGGGCGTCG ATAGACCTCA CGCCCTTCGA TAACTCCGAG
ATCACCACCA TCGAGGAACA CATCAAGCGC AAGTGGGCGG ACATCTCGGC GGAAACCGCC
GGAGAGCAAT ACACGCCTTC CGATGTCATC GACCTTGCCA CCGCTATCAT CATCGAACTG
CGCCGCGAAG GCAAAGGCGG CACCGGCATT GCCGATGTGT ATGACATGGC CTGCGGCGGC
GGCAACTTTC TGTTCGCCAC CGAAGATGCT CTGCGCGACG CCTTCCCCAA GCTTTCCGTG
CGCACCCGTG GCCAAGAACT GAATGATCCG CTGTTCGCGC TGGCATCCAT CGAAGCCCGC
TTCCGCGAGG ATGCCCAAAT CGAATGGGGC AACACCCTCA CCAACGATCT TTTCCTCCTC
GATAAATTCG ACGCCATTGT CGCCAACCCG CCCTATGGCG TGGACTGGAA AGACTTCAAG
CAAAGCCTGG GCATGGATGC CTCGGGGCGC TTCGCCAAGG ACAGGATGCC ACCCACCTCC
GATGGTCAGC TCCTGTTTTT GCAGCACGCC GCGTTTCACC TGTCCGAGGT TGGGGTAGCC
GCGATTGTTC ATTCCGGCTC AACCCTGTTT TCCGGCGATG CCGGTGGGGG TGAATCCGAA
ACCCGGCGCT GGCTGATCCA GCAACAGGAC ATCGTCGAAG CCATCATCCA GTTGCCCAAG
AACGAGTTTT TCAACACCGG CATTTCCACC TACCTGTGGA TACTCAACCG CGCCAAGCCG
CAGGCGCGCA AGGGCAAAGT GCTACTCATC AATGCCGAAG ACCAGTTCGT CAAACTCAAG
AAGAATCTCA ACAAGAAGAA CTGCAAGATC GACGAAGCCA ACTGCGCAGC GATTGTGAAA
GCCTTCCGCG CCTGCAAAGA CGGCCCCATC TCTAAAGTGC TCACGGTCGA TCAACTGCTC
TACAACAAGG TCGAAATCAT CCTGCACCGC CACGACGCGG AAGGGCGTGC CATCCAGGAA
GAAACCGCCC TCAATGGCGA GGTCATCACT GTGACAATTG GAGGGCAAAG CCACATCATC
AAGAATGGCC CGTTGATCAA GCCGGATCAC CTGACCACTA AGGAAGCTGC CGCCGCGTTC
AACGAGGCCA TCAAGGCGGC GGAAACCCTC ACCGTGCAAT CGGGCAAGCT CACCTACACA
CGCGACAACG AAACTGGTGC GATCCGCCTT GACGATGGCA CGACCCTCTC CGAACTCGGC
CTGGGCGTGC TGGCTGTCAA GGCCAAGGTC GCCAAGGCCA GGGGCGCGGA AGTGCTCAAG
GTCGAAGTCA CCCTCGGCCC GCTAAAAGAG AAGGATACCG AGACCACAGC CTTTTCGTTC
GACCCGGCCG GCAACGATGC CATCATCCGC GACTTTCTCG CCACCTGGGT GAAAGAACCG
TTCGAGCGCG TGCCCGACGC CGTCACGGTC GGCTGCGAAA TCAACTTCAA TAAGCAGTTT
CCCAAGAAAA GCGAAGTGGG CACTGTCAAG GACTTACTGG AAAAACTGCA CCGGCTTAAC
GCCAAGGGCG CGGAACAGGA AGCAGACTTC ACCGCCAGCA TCTCGGGGGC ATGA
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| Protein sequence | MTQKIGAGLL EYAGKIWDTA DTLRGAGIKE SEWPTYMMPF FALMMLESRL RRFKQERIAE
YEEETGAAFD PEDATHAKWL DDTAKAVGKG YHKDLLLHDK GLRETCLVPG GNFLNRLLSH
LNSYDPDTKK LLGIDYAQGS AKFLDMQGKA SDLNARDNNP LYPFAQKWAS IDLTPFDNSE
ITTIEEHIKR KWADISAETA GEQYTPSDVI DLATAIIIEL RREGKGGTGI ADVYDMACGG
GNFLFATEDA LRDAFPKLSV RTRGQELNDP LFALASIEAR FREDAQIEWG NTLTNDLFLL
DKFDAIVANP PYGVDWKDFK QSLGMDASGR FAKDRMPPTS DGQLLFLQHA AFHLSEVGVA
AIVHSGSTLF SGDAGGGESE TRRWLIQQQD IVEAIIQLPK NEFFNTGIST YLWILNRAKP
QARKGKVLLI NAEDQFVKLK KNLNKKNCKI DEANCAAIVK AFRACKDGPI SKVLTVDQLL
YNKVEIILHR HDAEGRAIQE ETALNGEVIT VTIGGQSHII KNGPLIKPDH LTTKEAAAAF
NEAIKAAETL TVQSGKLTYT RDNETGAIRL DDGTTLSELG LGVLAVKAKV AKARGAEVLK
VEVTLGPLKE KDTETTAFSF DPAGNDAIIR DFLATWVKEP FERVPDAVTV GCEINFNKQF
PKKSEVGTVK DLLEKLHRLN AKGAEQEADF TASISGA
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