Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1350 |
Symbol | |
ID | 3960578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1453415 |
End bp | 1454065 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637916166 |
Product | HhH-GPD |
Protein accession | YP_522615 |
Protein GI | 89900144 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.646647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCTA CCAGCACTAC AGCGGCAGTG GCCGCGGCTC CCGCCTACTG GAGCGACGCG TGTAAACACC TGATGAAAAA AGACCGGGTG ATGAAGCGGC TCATTCCGCA GTTTGGCGAC GCCTGCCTGC AAACCCGGGG CGATGCTTTT GTGACGCTGG CGCGCAGCGT GGTGGGTCAG CAGATTTCGG TCAAGGCAGC TCAAACCGTA TGGAATCGTT TTGCGCTGCT GCCCAAGAAG ATCACAGCGG CCAACGTGCT CAAGCTCAAA GTTGATGACA TGCGCGCCGC GGGCTTGAGT GTGCGCAAGG TCGAATATCT GGTGGACCTG GCGCTGCACT TTGACAGTGG CACGGTGCAT GTCGAGACCT GGGAGACCAT GGACGATGAG GCGATCATCG CCGAGTTGAT TGCCATTCGT GGCATTGGCC GTTGGACGGC TGAGATGTTC TTGATCTTTC ACCTGATGCG CCCCAATGTG TTGCCGCTTG ACGACGTGGG GCTGATCAAT GGCATCAGCA AGAACTATTT TTCAGGCGAC GTGGTCAGCC GCAGTGACGC CCGCGAAGTA GCCGCCGCCT GGGCGCCGTA TTGCAGTGTT GCAACTTGGT ATATTTGGCG CTCGCTGGAT CCACTGCCGG TGGACTATTG A
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Protein sequence | MSATSTTAAV AAAPAYWSDA CKHLMKKDRV MKRLIPQFGD ACLQTRGDAF VTLARSVVGQ QISVKAAQTV WNRFALLPKK ITAANVLKLK VDDMRAAGLS VRKVEYLVDL ALHFDSGTVH VETWETMDDE AIIAELIAIR GIGRWTAEMF LIFHLMRPNV LPLDDVGLIN GISKNYFSGD VVSRSDAREV AAAWAPYCSV ATWYIWRSLD PLPVDY
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