| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1346 |
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| Symbol | |
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| ID | 3960574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1448861 |
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| End bp | 1449460 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637916162 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_522611 |
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| Protein GI | 89900140 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATATA TACGTTTATG GGCTATAGCC CCCGCAGTTG CTGGACTTTT AGCTATATTT
TCAATAGCAT CAGAGGCATC GGCGCAGGCA CCAGCCCAGG TCAAGTTTGC CACCACGGCA
GGCGACTTTG TGGTCGAGGT TTACCCCGAC AAAGCACCCA AAACAGTCGA CAACTTTTTA
CAGTACGTCA AAGACAAACA TTACGACGGC ACGATCTTCC ACCGCGTGAT TCCCAACTTC
ATGATCCAGG GCGGTGGCTT TGATGCCCAG TACGTGCAGA AAAAAACTCG CGCTCCCGTG
CCTCATGAAG GCCGCGAAGC ACTGGCCAAG GGCGGCCAAA GAAATGTGGT CGGCACCTTG
GCCATGGCCC GTACCAATGA CCCGCAATCG GCGACGGCAC AGTTCTTCAT CAACGTCAAA
GACAATGCAT TTCTGGACCC CACGGCGGAT CAATATGGCT ACACCGTGTT TGGCAAGGTC
ACCAGCGGCA TGGATGTGAT CCAGAAAATC AAGGCCGTGC CCACCGGCCC GGCCGGCCCT
TTTGGCTCCG ATGTTCCCAA AACCCCAATT CTTATCAACT CTGCAACCCT GGTGAAGTAA
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| Protein sequence | MKYIRLWAIA PAVAGLLAIF SIASEASAQA PAQVKFATTA GDFVVEVYPD KAPKTVDNFL
QYVKDKHYDG TIFHRVIPNF MIQGGGFDAQ YVQKKTRAPV PHEGREALAK GGQRNVVGTL
AMARTNDPQS ATAQFFINVK DNAFLDPTAD QYGYTVFGKV TSGMDVIQKI KAVPTGPAGP
FGSDVPKTPI LINSATLVK
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