Gene Rfer_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1344 
Symbol 
ID3960572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1447519 
End bp1448349 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID637916160 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_522609 
Protein GI89900138 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAT CCCGGCCCAG GAACACGACG CCAACCGTGG CGCCATCCTG GCCGGTACTG 
CAAGCGCCCG CGCACTGGCG GCAACTTGAT TTCATCTCTG ACTTGCACCT GCAGGACAGT
GACCTCGCCA CCTTCAGCGC CTGGCAACAC TTTATGCAGA CGACGCGGGC CGACGCCGTG
TTTATCCTGG GTGATCTGTT TGAAGTGTGG GTCGGTGACG ATGTGTTGGC AACGCCCGGC
TTTGAAACCC GCTGTGCTCA GGTTCTGCAA GCTGCCTCGC ATCGGCTGAC CATTTTTTTG
ATGCGCGGCA ACCGCGATTT TCTGCTGGGC GACGCCTTTG CCCAGGTTGG CGGCCTGACC
CTGCTGGACG ACCCCTGCGT ACTGGACTTT GCCGGACAAC GCTGGCTGCT TTCGCATGGC
GATGCTTTGT GCCTGGAAGA CACCGACTAC CAGCAGTTTC GCTCGCAGGT GCGCAGCGCG
GCCTGGCAAC AAGACTTTTT GAGCCTGGCT CTGACGCAGC GCCAGCAGTT GGCGCATGAC
ATGCGGATGC AAAGCGAAGC ACGCAAGCGC AGCGGTGCGA CGTATGCCGA CCTTGACGAG
CCAATGACCT GCAGCTGGTT GCACATGGCC CAGGCCAGCA CGCTGATTCA TGGCCACACC
CACAAGCCTG CTGACCACCA GATGACCGAT GGCCTGCGCC GCATCGTCCT GAGCGATTGG
GACGCCACCG CTACGCCAGC GCGTGCTGAA GTGTTGCGCC TGAGCGCGGC TGTTGCGGGT
CAAGCCGAGG GCAGCACCGT GCAACGCCTG CAGGCCACTC GGGCAGAGTG A
 
Protein sequence
MSASRPRNTT PTVAPSWPVL QAPAHWRQLD FISDLHLQDS DLATFSAWQH FMQTTRADAV 
FILGDLFEVW VGDDVLATPG FETRCAQVLQ AASHRLTIFL MRGNRDFLLG DAFAQVGGLT
LLDDPCVLDF AGQRWLLSHG DALCLEDTDY QQFRSQVRSA AWQQDFLSLA LTQRQQLAHD
MRMQSEARKR SGATYADLDE PMTCSWLHMA QASTLIHGHT HKPADHQMTD GLRRIVLSDW
DATATPARAE VLRLSAAVAG QAEGSTVQRL QATRAE