Gene Rfer_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1342 
Symbol 
ID3960569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1446487 
End bp1446795 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content53% 
IMG OID637916157 
Productintegration host factor, alpha subunit 
Protein accessionYP_522607 
Protein GI89900136 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCAC TGACTAAAGC GCAACTGGCT GAGCTGCTGT TTGAGAAAAT CGGCTTGAAC 
AAGCGCGAAT CCAAAGACAT GGTGGACGCG TTCTTTGACC TGGTGGCTGA CAGCCTGCTA
AAGGGTGAGG ACGTCAAGAT TTCAGGTTTT GGAAATTTTC AGATTCGCAC CAAGGCGCCA
CGCCCAGGGA GAAATCCGCG CACCGGTGAG ACCATTCCCA TTCAGGCGCG CCGGGTGGTG
ACGTTTCATG CGGGTTATAA ACTCAAAGAG CAAATTCAGG ATCAAGAGCT GGTGCCTTTG
GCGCCATAG
 
Protein sequence
MPALTKAQLA ELLFEKIGLN KRESKDMVDA FFDLVADSLL KGEDVKISGF GNFQIRTKAP 
RPGRNPRTGE TIPIQARRVV TFHAGYKLKE QIQDQELVPL AP