Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1342 |
Symbol | |
ID | 3960569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1446487 |
End bp | 1446795 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637916157 |
Product | integration host factor, alpha subunit |
Protein accession | YP_522607 |
Protein GI | 89900136 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCAC TGACTAAAGC GCAACTGGCT GAGCTGCTGT TTGAGAAAAT CGGCTTGAAC AAGCGCGAAT CCAAAGACAT GGTGGACGCG TTCTTTGACC TGGTGGCTGA CAGCCTGCTA AAGGGTGAGG ACGTCAAGAT TTCAGGTTTT GGAAATTTTC AGATTCGCAC CAAGGCGCCA CGCCCAGGGA GAAATCCGCG CACCGGTGAG ACCATTCCCA TTCAGGCGCG CCGGGTGGTG ACGTTTCATG CGGGTTATAA ACTCAAAGAG CAAATTCAGG ATCAAGAGCT GGTGCCTTTG GCGCCATAG
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Protein sequence | MPALTKAQLA ELLFEKIGLN KRESKDMVDA FFDLVADSLL KGEDVKISGF GNFQIRTKAP RPGRNPRTGE TIPIQARRVV TFHAGYKLKE QIQDQELVPL AP
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