Gene Rfer_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1330 
Symbol 
ID3961361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1429155 
End bp1429955 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content65% 
IMG OID637916145 
Producthypothetical protein 
Protein accessionYP_522595 
Protein GI89900124 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.480841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCCTGA TCGCCTGGAA CTGGCAACCC GCCAGCCACA CCCCGCTGTT GCTCATCGCC 
AACCGCGACG AGTACTACGC GCGCCCCACT GCACCCCTGC ACTGCTGGGA TGACGCGGAC
ATCCTGGCCG GGCGCGATTT GCAGGCGGGT GGCACCTGGC TGGGCATCAG CCGCTCGGGA
CGGTTGGCCG CATTGACCAA TCACCGCAAT CCAGCGGCCC TGCGCGCGGA TGCACCCTCA
CGCGGCGAAC TGGTCAGCGC TTACTTACAG ACCGACGCCA GCGCGCTGGA CTACCTGATG
GAACTGGCCG GGCGCGCCGG CGACTACAAC CCGTTTAACC TGCTGGTTTT TGACGGCACC
CGCCTGCTGG GTCTGGAGAG CCGCCACGCC AAGGTGACTG CCATGCAGCC GGGGCTGGGC
GCCGTGTCCA ATGCGGATTT TTTGACACCC TGGCCCAAGC TGGCCAACAT AAAAGGTGGT
CTGCAAACCC TGCAAGGGCA AGAGCCGCCC AGCGATGCCC AGTTGCTGGC GCTGCTGCAA
AACCCAAGCG TTGCCGCCGA TGCCGACTTG CCAGACACAG GCATCCCGCT GGAATTCGAG
CGCGCACTCT CGGCCGCATT CATCGCCCTG CCGGATTACG GCACCCGCGC CTGCAGCATC
GTGCGATTTG AGGCAGATCA CATCACGTTT CTGGAACAGA GCTTTGATGC CCATGGCGCC
ACAGGTACCC GCCAACTCAC GACCGCATGG CGCCGCGTGC CCTCCTTGCG CACGGAGAAC
CGGCCACCAC CAGTCTCATA A
 
Protein sequence
MCLIAWNWQP ASHTPLLLIA NRDEYYARPT APLHCWDDAD ILAGRDLQAG GTWLGISRSG 
RLAALTNHRN PAALRADAPS RGELVSAYLQ TDASALDYLM ELAGRAGDYN PFNLLVFDGT
RLLGLESRHA KVTAMQPGLG AVSNADFLTP WPKLANIKGG LQTLQGQEPP SDAQLLALLQ
NPSVAADADL PDTGIPLEFE RALSAAFIAL PDYGTRACSI VRFEADHITF LEQSFDAHGA
TGTRQLTTAW RRVPSLRTEN RPPPVS