| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1328 |
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| Symbol | |
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| ID | 3961359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1426985 |
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| End bp | 1428355 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637916143 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_522593 |
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| Protein GI | 89900122 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC AGACCAAGTT TCTTTTGAAC GAAGACCAGA TGCCAAAATT TTGGTACAAC
CTGCAGGCCG ATTTGCCCAA GCCGATGCCA GCCGTGCTGC ATCCGGGCAC CCTGCAGCCA
GTCGGGCCCG ATGACCTGGC ACCCTTGTTC CCCATGGCGC TGATCATGCA GGAGGTGAGC
CAGGAGCGCG AGATCGAGAT TCCTGAGCCG GTGCGCGATG TGTTTCGGCT GTGGCGGCCA
GCACCGCTGT TTCGCGCCCA CCGCCTTGAA AAAGCGCTCG GCACGCCGGC CAAGATTTAT
TACAAATACG AGGGTGGCAG CCCGGCGGGT AGCCACAAGC CCAACACCGC CGTGCCGCAG
GCGTTCTACA ACCAAGAGGC CGGCATCAAG CGGCTGGTGA CCGAAACCGG GGCCGGCCAG
TGGGGCTCCT CGCTGGCCTT TGCCGGCTCG CTCTACGGCC TGGAAGTTGA AGTGTTTCAG
GTGCGTGTGT CGTACGACCA AAAACCGTAT CGGCGCGCCT TGATGGAAAC CTATGGTGCG
CGTTGTGTCG CCTCACCCTC CCATGAGACG GTGTATGGCC GCTCCGTGCT GGCCAAGAAC
CCGAACCATC CGGGCAGCCT GGGCATTGCG ATCTCGGAAG CGGTGGAGCT CGCCGTGCAG
CGCGAGGACA CCAAATACGC GCTCGGCTCG GTGCTCAACC ATGTGCTGTT GCACCAGACC
ATCATCGGGC AAGAGGCCAT GCTGCAGATG CAAATGGCCA ATGACTGGCC CGATGTGGTG
GTGGGTTGTG CCGGCGGCGG CTCCAATCTG GCGGGCATTG CTTTTCCCTT CATCGGGCAC
GGCTTGCGAG GTGGCCAGAA ACCACGCATC GTGGCGGTTG AACCGGCGGC TTGCCCCACG
CTGACGCGCG GCAAATACGC CTACGACTTT GGCGACACCG GGCACATGAC ACCTTTGACC
AAGATGTACA CGCTGGGCAG TCAGTTCACG CCGCCGGGCT TTCATGCGGG CGGCCTGCGC
TACCACGGCA TGGCACCCCT GGTGTCGCAT TGCAAGGCCT TGGGGCTGTT AGAGGCGGTG
GCCTATGACC AGGTGGCGTG TTTTGAAGCC GGCGTGCTGT TTGCGCGCAA CGAGGGTATC
GTGCCCGCGC CCGAGTCCAA CCACGCGATC AAGGGCGCGA TTGAAGAGGC CATGCGCTGC
AAGCGCGAGG GCAAGGCAGA GACCATCCTG TTTTGCCTGA GTGGGCACGG TCATTTCGAC
ATGACGTCCT ACCAGAAGTA CTTTGCCGGT GAGTTGACCG ACGAGCATTA CGACGAGACC
GAGTTGGCGC TGGCGCTGGC CAGTTTGCCG AACGTGCCGG AAACGGTGTG A
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| Protein sequence | MSKQTKFLLN EDQMPKFWYN LQADLPKPMP AVLHPGTLQP VGPDDLAPLF PMALIMQEVS
QEREIEIPEP VRDVFRLWRP APLFRAHRLE KALGTPAKIY YKYEGGSPAG SHKPNTAVPQ
AFYNQEAGIK RLVTETGAGQ WGSSLAFAGS LYGLEVEVFQ VRVSYDQKPY RRALMETYGA
RCVASPSHET VYGRSVLAKN PNHPGSLGIA ISEAVELAVQ REDTKYALGS VLNHVLLHQT
IIGQEAMLQM QMANDWPDVV VGCAGGGSNL AGIAFPFIGH GLRGGQKPRI VAVEPAACPT
LTRGKYAYDF GDTGHMTPLT KMYTLGSQFT PPGFHAGGLR YHGMAPLVSH CKALGLLEAV
AYDQVACFEA GVLFARNEGI VPAPESNHAI KGAIEEAMRC KREGKAETIL FCLSGHGHFD
MTSYQKYFAG ELTDEHYDET ELALALASLP NVPETV
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