Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1323 |
Symbol | |
ID | 3961354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1419629 |
End bp | 1420624 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637916138 |
Product | homoserine kinase |
Protein accession | YP_522588 |
Protein GI | 89900117 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.844866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTTT ACACAGAAGT CTCTACCCAA GAGGCACGCG CCCTGCTGCG ACAACTCAAG CTGGGCGAAC TCACCGCCAT GCAAGGCTGC ACCAAGGGCA TCGAAAACAC CAATTATTTT GTCAGCACCG AGCAGGGTGG CGAAACCTTT GATTACGTGC TGACCCTGTT CGAGCGACTC ACTTTGGCGC AGCTGCCGTT TTATCTGCGC CTGATGAAAC ACCTGGCCGA GCGCGGCATC CCGGTGCCCG AGCCGAGCGC CAATGCGCGC GGTGATCTGG TGTTTGAGTT CAAAGCCAAA CCGGCCGCGG TGGTGACCCG ATTACGCGGC AGCAGCGAGC TCTCGCCCAC GCCGGCCCAT TGCGCGGCCA TCGGCACCAC CTTGGCCAAA ATGCACCTGG CCGCACGGGA CTTCCCGCTG TCGCAGCCCA ATTTGCGCGG CCTGGCCTGG TGGAATGAAA CGGTGCCGGT GGTGCTGCCC CATGTCAACC CGACGCAGGC CGCGTTGCTG CAAAGCGAAC TGGCCTATCA AAACCACGTC GCCGCCTCAT CGGCTTATGC CGCCCTGCCC CGTGGACCGA TACACGCCGA CCTGTTTCGG GACAACGTGA TGTTTGACAA CGGGCAAGGC CAGTTGGAGC TCACCGGCGT CTTCGACTTC TATTTCGCCG GCGTCGACAG TTGGCTGTTT GATTTGGCGG TTTGTCTGAA CGACTGGTGC ATTGATCTCG ACACCGGGAC GCATGACGGG GAGCGTTTTC AGAGCTTCCT GCGCGCCTAC AGCGCGGTGC GACCGCTCGA GAGCGCGGAG CGGGCGCTGC TGCCCGCCCT GCTGCGCGCA GCAGCCCTGC GTTTCTGGAT TTCACGCCTG TGGGACTACT ACCTGCCGCG CCCGGCAAGC CTGCTCCAGC CCCACGACCC GGCCCATTTT GAACGGGTGC TGCAGCAACG GGTCATGCAC CCGCAGGCCG CCAACTCGCT GGAGATGCAG CCATGA
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Protein sequence | MAVYTEVSTQ EARALLRQLK LGELTAMQGC TKGIENTNYF VSTEQGGETF DYVLTLFERL TLAQLPFYLR LMKHLAERGI PVPEPSANAR GDLVFEFKAK PAAVVTRLRG SSELSPTPAH CAAIGTTLAK MHLAARDFPL SQPNLRGLAW WNETVPVVLP HVNPTQAALL QSELAYQNHV AASSAYAALP RGPIHADLFR DNVMFDNGQG QLELTGVFDF YFAGVDSWLF DLAVCLNDWC IDLDTGTHDG ERFQSFLRAY SAVRPLESAE RALLPALLRA AALRFWISRL WDYYLPRPAS LLQPHDPAHF ERVLQQRVMH PQAANSLEMQ P
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