Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1314 |
Symbol | |
ID | 3961538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1405656 |
End bp | 1408232 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637916129 |
Product | cyanophycin synthetase |
Protein accession | YP_522579 |
Protein GI | 89900108 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02068] cyanophycin synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.098804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATCT CACGCGTTCG CGCCCTGCGC GGCCCCAATC TCTGGAGCAG TCACACCGCC ATCGAGGCGG TCGTGACCTG CACACCGGCC GAGTGCGCCA TCAACACGCA CGACGGCTTT GAGAGCCGTC TTCGGGCGCG CTTCCCAAAA CTCGGAACAC TGCTGCCGAC CGGGCACGAC GCCACGGTAC CCATGGCCCA TGTGCTCGAA ATGGCCGCGC TGGATCTGCA GGCCCTGGCT GGCTGCCCGG TTACCTTCGC ACGCACAACG GCCACCACGG AACCCGGCGT CTACCAGATT GTGGTGGAGT ATTCAGAAGA GGCGGTGGGC CGCCTGGCCC TGGAGCTGGC CCAATCCCTG TGTCTGGCGG CGCAAAACGA CACCCCCTTC GATCTGCCGC AAGCGCTGCA GCGCTTGCGC GAACTCGACG AAGATGTACG CCTGGGGCCG AGCACGGGCG CCATCGTGCA GGCGGCGCTT GCGCGCAACA TTCCCTTTCG CCGCATGACG CAAGGCAGCA TGATCATGTT TGGCTGGGGC AGCAAGCAGC GCCGCATCCA GGCCGCCGAA ATGGACATCA CCGGTGCCAT CGCGGAAGCA ATCGCCCAGG ACAAACAGCT GACCAAAAAG CTGCTGGCTG CGGCGGGCGT GCCGGTTCCG CTCGGCCGTG AGGTCGATAC CCCTGAAGAT GCCTGGATGG CCGCCTGCGA AGTCGGTCTG CCGGTCGTGG TCAAGCCCAA GAGTGGCAAC CAGGGCAAGG GCGTGACGGT CAACATCACG TCGCGTGAAC AGCTGACAGC GGCTTACGCG GCAGCCGCCG AGTTCGGCGA TGACATCCTG GTCGAACGCT ACATTCCCGG TAACGACTTT CGCCTGCTGG TGGTTGGCAA CAAGCTGGTG GCAGCGGCCT ATCGTGAACC GCCCAACGTG GTGGGTGATG GTCAGCACAC CATCCGTGAA ATGGTGGAAC AGGTCAACAA AGACCCGCGC CGCGGCTCCG GCCATGCGAC CTCGCTGACC AAAATCCGAT TTGACGATAT TGCCCTGGCG TGCCTGGCAG GCCAGGGCCT TGATGCCGAC TCGGTTCCCC CCAAGGGCCA ACGCGTCACC CTGCGCCACA ACGCCAATCT ATCCACCGGC GGCTCCGCCA CCGATGTCAC CGACAGCGTG CACCCGGAAG TGGCAGCCCG TGCCGTGGCT GCCGCACGAA TGGTGGGACT CGATATTTGC GGCGTGGACG TGGTCTGCAA CAGCATCCTG CATACGCTCG AAGAACAGGG CGGCGGCGTG GTCGAGGTCA ATGCCGCGCC CGGTCTGCGC ATGCACCTGT CGCCGTCCTA CGGCAAGGGG CGCCCGGTGG GTGAGGCCAT CATCACCAGC ATGTTCGACC AGCATGAGAA TGGCCGTATT CCGCTGGTGG CCGTCACCGG CACCAACGGC AAGACCACCA CCGTGCGCCT GATCTCGCAC CTGCTGGCCC AAAACGGCCT GCGCGTCGGC ATGACCAATA CGGATGGTGT CTACATCGCG GGTCAGCGCA TCGACACCGG CGACTGCAGC GGCCCCAAAA GTGCGCGCAA TGTGTTGCAG CACCCCGACG TGGATGCCGC CGTGCTGGAA ACCGCCCGCG GCGGCATGCT GCGCGAAGGG CTGGCCTTTG ACCGTTGTGA TGTGGCCGTG GTGACCAATG TCGGAAGCGG TGACCACCTG GGCCTGAACT ACATCACGAC GGTTGAAGAT CTGGCCGTGC TCAAACGCGT GATCGTACAA AACATCGCCA GTGACGGTGT GGCGGTGCTC AATGCGGCGG ACCCCATTGT GGTCTCCATG GCCAGGCACT GCAGCGCTTC GATCATCTTT TTTGCCATGG ACAGGCATCA TCCGGTCATG GCCACGCACT TGGCGCAGGG GCGACGCGCC GTCTACGTGG AAGGCGACCA TCTGGTGGCT GCCGAGGGCA AGGTGCAGCA CCAGATGGCG CTGTCGGACA TCCCCATTTC CCGTCGGGGC ACCATCGGGT TTCAGATCGA AAACGTCATG GCTTCGGCGG CTGCCGTATG GGCCCTTGGG GTCGGGTGGG AGACGATCAA GCTCGGACTG GCCAGTTTTA TCAACAACAA CGACAACGCA CTGGGCCGCT TCAACCTGTT CAGCTACCGG GGCGCCACCG TCATTGCCGA CTACGGCCAC AACCCGGATG CGATTGCGGC GCTGGTTCAG GCGGTGGCAA GCATGCCCTC CAAGCGTCGC ACCGTCGTGA TCAGCGGCGC CGGCGACCGG CGCGATGAAG ACATTCGCCA ACAGACTGAA ATTCTGGGCA ACGCGTTTGA CAACGTGGTG CTGTACCAGG ACCAGTGTCA GCGCGGCCGC GCCGACGGCG AGGTGCTGGC GCTGCTGCGC GAGGGTCTGG CCCATGCGAC ACGCACCGAA TCCATCGCCG AGATTCAGGG TGAGTTTCTC GCCATTGACA CCGCGATGGA CACCCTGGGC GAGGGCGATC TGTGCCTGAT TCTGGTTGAT CAGGTCGAGC AAGCGCTGGC GCATATTGCA ACGCGAATTA AAAAAGACGC GGGCTGA
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Protein sequence | MDISRVRALR GPNLWSSHTA IEAVVTCTPA ECAINTHDGF ESRLRARFPK LGTLLPTGHD ATVPMAHVLE MAALDLQALA GCPVTFARTT ATTEPGVYQI VVEYSEEAVG RLALELAQSL CLAAQNDTPF DLPQALQRLR ELDEDVRLGP STGAIVQAAL ARNIPFRRMT QGSMIMFGWG SKQRRIQAAE MDITGAIAEA IAQDKQLTKK LLAAAGVPVP LGREVDTPED AWMAACEVGL PVVVKPKSGN QGKGVTVNIT SREQLTAAYA AAAEFGDDIL VERYIPGNDF RLLVVGNKLV AAAYREPPNV VGDGQHTIRE MVEQVNKDPR RGSGHATSLT KIRFDDIALA CLAGQGLDAD SVPPKGQRVT LRHNANLSTG GSATDVTDSV HPEVAARAVA AARMVGLDIC GVDVVCNSIL HTLEEQGGGV VEVNAAPGLR MHLSPSYGKG RPVGEAIITS MFDQHENGRI PLVAVTGTNG KTTTVRLISH LLAQNGLRVG MTNTDGVYIA GQRIDTGDCS GPKSARNVLQ HPDVDAAVLE TARGGMLREG LAFDRCDVAV VTNVGSGDHL GLNYITTVED LAVLKRVIVQ NIASDGVAVL NAADPIVVSM ARHCSASIIF FAMDRHHPVM ATHLAQGRRA VYVEGDHLVA AEGKVQHQMA LSDIPISRRG TIGFQIENVM ASAAAVWALG VGWETIKLGL ASFINNNDNA LGRFNLFSYR GATVIADYGH NPDAIAALVQ AVASMPSKRR TVVISGAGDR RDEDIRQQTE ILGNAFDNVV LYQDQCQRGR ADGEVLALLR EGLAHATRTE SIAEIQGEFL AIDTAMDTLG EGDLCLILVD QVEQALAHIA TRIKKDAG
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