Gene Rfer_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1296 
Symbol 
ID3962169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp1390328 
End bp1391008 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content58% 
IMG OID637916111 
Producthypothetical protein 
Protein accessionYP_522561 
Protein GI89900090 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.127674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCCACC CAAGCGCTGG AAATCTCGTG CCCATCAAGA AGTACCTGCT CACTGGTTTA 
CTGGTCTGGT TGCCATTGGC CATCACCATT TGGGTGCTGT TGTGGCTGGT CGGGCTGCTC 
GATGCCATTT TTGGCGGTTT ATTGACGGGA CTGGTCGCGT TGACCCCCAA CTCGGCGGGC 
ACCCTGATTG AGCCGCTGCG CCATATTCCC GGGCTTGGCG TGGTGCTGGT TTTTAGCGCC 
TTGCTGGTAA CGGGCGCACT GGTCTCCAAT GTGGCAGGCC GCTGGTGGCT GGCGCAATGG 
GACCGGTTGT TTGCCCATAT CCCGGTTTTC AAGTCGATCT ACAACAGCGT CAAGAAAGTG 
TCGGACACGC TTTTTTCCAG CAATGGCAAT GCGTTTCGCA AGGCCATGCT GGTCCAGTAT 
CCGCGCGCCG GTGTCTGGAC TGTTGCGTTC CAGACCGGCA CTCCCGGCGG CGAGGTGGCT 
CACCACCTCG GGGCTGATTT TGTGAGTGTT TATGTTCCGA CGACGCCGAA CCCGACCAGT 
GGGTTTTTTC TGCTGCTGCC GCGCTCCGAA GTGATTGAAT TGCGCATGAG TGTGGATGAG 
GCACTGACCT ATGTCATTTC CATGGGTTCA GTGGCACCAG CGGTCGCAAT TGAGCTTGCG 
CCCAAGCAAG TTTCGCCTTA A
 
Protein sequence
MPHPSAGNLV PIKKYLLTGL LVWLPLAITI WVLLWLVGLL DAIFGGLLTG LVALTPNSAG 
TLIEPLRHIP GLGVVLVFSA LLVTGALVSN VAGRWWLAQW DRLFAHIPVF KSIYNSVKKV 
SDTLFSSNGN AFRKAMLVQY PRAGVWTVAF QTGTPGGEVA HHLGADFVSV YVPTTPNPTS 
GFFLLLPRSE VIELRMSVDE ALTYVISMGS VAPAVAIELA PKQVSP