| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1275 |
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| Symbol | |
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| ID | 3960633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1368389 |
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| End bp | 1368946 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637916090 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_522540 |
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| Protein GI | 89900069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTCATG GGCAGTCAGA GGCTGGCCGT CAGGTTGAGG AACCCCTGAT GGACTCGGTG
CGCAGCGCGT TAAGTTCCGC GATTGCCAAC CATGCGCCGC CCGTGCCGGA ATTCCCGGAT
ACCGAATCGC GCCTCGTCTA CCTGCGCTGG TTGGGGGCCA TGAGTGATCG GCTGCGCAAA
AACAAGCCGG ACTGGAATGT GCGCCGCGAG TTTCTGCAAA CGCTCTGGTA CGAGAGCCGG
CGTGCCGGGC TGGACCCGGC GCTGGTGCTG GGCCTGGTGC AAGTGGAGAG CAACTTCCGC
AAGTTCGCCG TCAGCAGCGT CGGCGCCCGC GGCTACATGC AGGTGATGCC GTTCTGGACC
CGGCTGCTGG GCGATGGTGA TGCCGGCAAG CTGTTTCACA TGCAGACCAA TCTGCGCTTT
GGCTGCGTCA TCCTGCGCCA CTACCTGGAC CGCGAACGCG GCGACCTGTT TCTGGCGCTG
GGCCGGTACA ACGGTTCCCG CGGCCAGGCG CCGTACCCGA ACGCCGTGTT CGGTGCCACC
CGGCGGTGGC AAAGCTGA
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| Protein sequence | MIHGQSEAGR QVEEPLMDSV RSALSSAIAN HAPPVPEFPD TESRLVYLRW LGAMSDRLRK
NKPDWNVRRE FLQTLWYESR RAGLDPALVL GLVQVESNFR KFAVSSVGAR GYMQVMPFWT
RLLGDGDAGK LFHMQTNLRF GCVILRHYLD RERGDLFLAL GRYNGSRGQA PYPNAVFGAT
RRWQS
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