| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1265 |
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| Symbol | |
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| ID | 3960622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1359764 |
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| End bp | 1360246 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637916079 |
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| Product | methylation |
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| Protein accession | YP_522530 |
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| Protein GI | 89900059 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00964428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGTT CTATGCAAAG GGGTTTTACC CTGATCGAAT TAATGATCGT CGTGGCGATT
ATTGGTATTT TGGCTGCGGT GGCCTTGCCG GCTTATCAGG ATTACACGAT CCGCGCCAAG
ATGTCAGAAG TTATTCTGGC AGCTTCAGCT TGCCGCACCA GTGTGACTGA GACGCGCCAG
ACGATTAATT CAGCATCGTT GCCGACTGCT GGTAAATGGG GTTGCGAAGC ATCGAACCCA
ACTACTAAAT ATGTTAAATC GATCAAGACT GACGACTTTG GCGCGATTGC AGTTGAAGTC
GAGACAGCCA ACCTCTCGCA GGTTACTGGC TCCGTGTTCT TGGTTCCGAC TGTGGTTAGT
GGCGCAATTA CTGGTTGGGA ATGCGGTCCA AGCACCTCTG GTATTGCAAA ATATCTTCCT
GGTTCATGCC GTAGTACTAT AGCAACAGGT TATACCGTCG TTGGTAGTTG GGCAGCCAAT
TGA
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| Protein sequence | MKRSMQRGFT LIELMIVVAI IGILAAVALP AYQDYTIRAK MSEVILAASA CRTSVTETRQ
TINSASLPTA GKWGCEASNP TTKYVKSIKT DDFGAIAVEV ETANLSQVTG SVFLVPTVVS
GAITGWECGP STSGIAKYLP GSCRSTIATG YTVVGSWAAN
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