| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1264 |
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| Symbol | |
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| ID | 3960621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1358008 |
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| End bp | 1359675 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916078 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_522529 |
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| Protein GI | 89900058 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.339425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTATC TACTTGGCTT TTCCCTTTTG TTCTTCAGTT GGTTAATGCC TTTGCATTTT
CCGCCTTGGG TCAGCTGGCA CAACGAAGTG CTGGCTTTTT TGGCGGTGTT GCTACTCGCC
TGGCACGGTG CGTTCGCCGC GGCGAAAAAA AATCTTGCAA CCACCGTTGC TATTCCTGTC
ACCGCGCTAC CGTTGGTCGC GTTGGGCCTG CTGATTTGGC TGCAGACCAC CACCGGCCTG
CTCACCTTTT TCGGTGATAC CTTCGTCCTC ACGGTGTACG TGATCATCTG CATTGCCTGC
ATGGCACTGG GGTATGCAGG CGGCAACGAG CAAAAAACCT ACCCCATCTT TGCTCGCACC
CTGCTGCTGG GCGCATTTTT ATCAGCCGTC ATCGCATTTG CCCAAGTGTT CGAGTTGTGG
GAAGACGCCG CTTGGATCAG CCGCATGCCG GAACTGCGCC GTCCTGGTGG CAATCTGGGG
CAGCCCAATC AGTTGGCGAC CTTGCTCCTG ATGGGTCTGG CCAGCCTGCT GTTCTTGTAC
GAGTCGAAAA AGCTCGGCGC GCTGGCATCA GCGTTACTCG CGCTCACCTT GCTGACGGGC
GTGGCCGCCA CCGAATCCCG CACCGGCGTG CTGAATCTGG GCCTGTTGAT GCTTTGGTGG
TTTGCCAAGC GCAGGTCACT TGACTTCAGG CTTTCGCCTT GGGTGGTGGT GTGCGGCGGC
GTGGCTTTTC TGGGTCTGTT TTGGTACTGG CCCAGTCTGA TGGATGCCGT CCAGCAAACC
GGCGGGTTCG GTGCGCAGGT CAATGTCAGT GTCGGTACTC GCTGGTTGGT CTGGCCGCAA
TTGATAGAGG CCGTGCTGCA ACGGCCATGG TGGGGCTGGG GCATGGGCCA GGTTTCGACC
GCGCAGAACG CAGTGGTTAG CTCTTATGCG GTGAGTGAGC CGTTTACCTA TGCGCACAAC
ATTGTGCTGG ACCTGGCCTT GGGGCTCGGC CTGCCGTTGG CCGCGCTGCT GGTGCTGGTG
ACCAGCGTTT GGCTCTGGCG TCGTTTGCGC TCGGCCGGCC AGTTGGCCCC CTGGTACTGT
CTGGCGCTGA TATTGCCCGT AGCGGTGCAT TCGATGCTGG AGTTTCCGTT TGCCTACGCC
TACTTTCTAG TGCCCGTCAT GTTCGCCGTT GGCGCGCTGG AAAGCGCGGT GGGAGCCAAA
CCCGCCTTTC GCCTGGGTGT GAAACCGGCG CTGGCCTCGT TGTTCGTAAC GACCGGGCTG
ATGGCGTGGT CGGTGGTCGA ATACGTCGCG ATCGAAGAAG ATTTTCGAAT TGTTCGCTTC
GAGGCGCTGC GCATTGGAAC AACACCTGCC AGCTACCAGC GGCCCCATGT GGTCTTGTTA
ACGCAACTAG ACGCGCTGCT GCACGGCGGA CGCATCGTGC CCAAGCCGGG CATGAAGGCG
GATGAAGTGG AGCTGGCCAG AAAAGTCGCC TTGCGCTTCC CCTGGCCCGC CACGCAAAAT
CGTTACGCCC AGTCGCTGGC CCTGAATGGC AAGCCCGACG AAGCCATCCG CCAGTTGCTC
GTCATGCGGG CACTGCATGG CGAAGCAGCC TATGCGCAGG TCAAAGCGGG CTGGACCGTG
CTGGCCCATG AGAAATACCC GCAACTGCAG ACGCTGAAAT TGCCTTGA
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| Protein sequence | MHYLLGFSLL FFSWLMPLHF PPWVSWHNEV LAFLAVLLLA WHGAFAAAKK NLATTVAIPV
TALPLVALGL LIWLQTTTGL LTFFGDTFVL TVYVIICIAC MALGYAGGNE QKTYPIFART
LLLGAFLSAV IAFAQVFELW EDAAWISRMP ELRRPGGNLG QPNQLATLLL MGLASLLFLY
ESKKLGALAS ALLALTLLTG VAATESRTGV LNLGLLMLWW FAKRRSLDFR LSPWVVVCGG
VAFLGLFWYW PSLMDAVQQT GGFGAQVNVS VGTRWLVWPQ LIEAVLQRPW WGWGMGQVST
AQNAVVSSYA VSEPFTYAHN IVLDLALGLG LPLAALLVLV TSVWLWRRLR SAGQLAPWYC
LALILPVAVH SMLEFPFAYA YFLVPVMFAV GALESAVGAK PAFRLGVKPA LASLFVTTGL
MAWSVVEYVA IEEDFRIVRF EALRIGTTPA SYQRPHVVLL TQLDALLHGG RIVPKPGMKA
DEVELARKVA LRFPWPATQN RYAQSLALNG KPDEAIRQLL VMRALHGEAA YAQVKAGWTV
LAHEKYPQLQ TLKLP
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