| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1254 |
|---|
| Symbol | |
|---|
| ID | 3962031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1347654 |
|---|
| End bp | 1348676 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637916068 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_522519 |
|---|
| Protein GI | 89900048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.103843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTATTT GCTTGAGTAA GTTTACATTG AAAATAATTG ATTTAAGTGG GTACATGTTT
TCCGGCAAAT CGGCGGTTAG TGATATTTTG CGTGAATTTG ATGGCATTCA AGTTCCAAAC
TACCGTGTTG AATTTGATTT GTTGAGAATG CCTGGCGGCA TGATTGATCT GAAACATGCA
GTTATGGATT GGTCGCCGGT AAGAACCTAT GGAGCAGTTC GTCGGTTTGA CAAGTTGGTC
AACATGCTTG CACTTTCTCC ACGTTTTCCG GGAAAATTAT ATAAAACCGG ATTTGGGTAC
ACCCAGCACT ATCCTAATAT ACTGCGCCTG AAAGACGAGT TTCTTCGGTC AATCATAGCA
GTTCAATGGG ACACGCCATG GCCTTATGCT GATATTGATG ATGGCCCAAT AGATACGTTC
GTGCGGAAAA TCTGCAGCAA GCTGTCCATA AGCAAATCAA GGAAATACTT CTTGGTGGAC
AAGGAAAAGT TTATACCAGC TTCGCAAAAA TTTATCCAGG GTTTGTTAAT AAATAGCATT
GCCAATGATC AACCCAGTGT CGTAGTTACA CACAATGCGT TGGAGCCTTT CTTGCCGGGG
AGGAATCTTG ATCTTCTGGG TGATGATGCC GTCTGTATTG TTGTTGATCG CGATCCCAGA
GATATATATG CGACTGCAAT AACCAGTCAG GTAGGATTTA ACGACAACCT GCGATTTTAC
CGCCGTATTG CGGGAGCACA TGATGTTGAG GTATTTATAA AAAGATACCT AATATATCGT
AAAAATATTA ATTTTGATGA TAGGCGTGTG CTTAGATTGA ACTTCAGGGA TCTTGTTTTG
GATTACAACC AGTCGTTACA GGAAATTTGC GACTTCTCTG GATTGGAACT GACGCAACAA
ATCCGCAAAC GCCAATTTTT TAATCCAGAT AATTCGAGAA ATAATATCGA TATCTGGAAA
CAGGCGTCAT TGAATTCATA TTCAGAGGAT TTCTCCAGAA TTGAGACTGA GTGCCATGCG
TAA
|
|---|
| Protein sequence | MFICLSKFTL KIIDLSGYMF SGKSAVSDIL REFDGIQVPN YRVEFDLLRM PGGMIDLKHA
VMDWSPVRTY GAVRRFDKLV NMLALSPRFP GKLYKTGFGY TQHYPNILRL KDEFLRSIIA
VQWDTPWPYA DIDDGPIDTF VRKICSKLSI SKSRKYFLVD KEKFIPASQK FIQGLLINSI
ANDQPSVVVT HNALEPFLPG RNLDLLGDDA VCIVVDRDPR DIYATAITSQ VGFNDNLRFY
RRIAGAHDVE VFIKRYLIYR KNINFDDRRV LRLNFRDLVL DYNQSLQEIC DFSGLELTQQ
IRKRQFFNPD NSRNNIDIWK QASLNSYSED FSRIETECHA
|
|---|
| |