| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1250 |
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| Symbol | |
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| ID | 3962027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1344138 |
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| End bp | 1344911 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637916064 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_522515 |
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| Protein GI | 89900044 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.396561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTC TTTTACTTGC AGGTGGCATG GGTACAAGAT TATCTGAAGA AACAGATATT
CGACCAAAGC CCATGGTTGA AATTGGTGGT CGGCCACTGC TTTGGCATAT TATGAAACTG
TATTCCCGGT ATGGGCACAA TGACTTTGTT GTGCTTTTGG GCTACAAGGG TTATCACATA
AAAGAATACT TTGCTAATTA TTTTTTGCAT CAAAGTGATG TAACCATCGA CTTGGCGACA
AATAAGTTGG AAGTTCACAG TAATAACAGC GAACCATGGC GCATCACCTT GCTAGACACC
GGCCCAGATA CGATGACCGG TGGACGCATC TGGCGCGCTA AGGACTTTGT TGCTAACGAT
CCATTCATGC TGACATATGG TGACGGTGTG TGTGATGTTG ATATGGATGC CCTGTTGGCA
TTTCATCGAC AACACGGAGG GGCGTTGACC ATGACCTCGG TACAGCCTGA TGGCCGTTTT
GGCACCTTTG CATCAGATGA GCGCGGTGCT GTCTCACGGT TTTTGGAAAA ACCACGGGGT
GATGGTTCGT GGATAAATGG TGGATTTTTT GTTTGTGAGC CACGGGTGCT TGACTACATC
ACGCTGGGTG ATGCAACAAT TTTCGAGCGT GAGCCTTTGC AGAATCTGGC CAACGATGGT
GAGTTGTTTA CCTATAAACA CCCTGGGTTT TGGAAGTGCA TGGACACACT ACGTGACAAG
TTGGATTTGA ATGCGCTGTG GCAATCTGGC GACGCGCCTT GGAAGACTTG GTAA
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| Protein sequence | MKVLLLAGGM GTRLSEETDI RPKPMVEIGG RPLLWHIMKL YSRYGHNDFV VLLGYKGYHI
KEYFANYFLH QSDVTIDLAT NKLEVHSNNS EPWRITLLDT GPDTMTGGRI WRAKDFVAND
PFMLTYGDGV CDVDMDALLA FHRQHGGALT MTSVQPDGRF GTFASDERGA VSRFLEKPRG
DGSWINGGFF VCEPRVLDYI TLGDATIFER EPLQNLANDG ELFTYKHPGF WKCMDTLRDK
LDLNALWQSG DAPWKTW
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