| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1248 |
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| Symbol | |
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| ID | 3962025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1342646 |
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| End bp | 1343578 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637916062 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_522513 |
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| Protein GI | 89900042 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.63849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA CCGATAAAGT TGCAGTTTGC TCACGCTCAT TCTCCAAAAA TCCAGTACTC
CGTGCCGAGT TGCTTGCACG CTATAGTCAG GTTACCTTTA ATGATAGCGG CCAGCAATAC
GAAGGCGACG CATTGGTGGC TTTCCTGCGC GGGCATGACA AGGCGATCAC CGCCCTGGAG
AAAATCGATC ATGCTGTTTT ATCCCAATTG CCTGACTTAA AAGTGATTGG CAAATATGGG
GTCGGCCTTG ACATGATTGA TATGGCGGCC ATGCGTCATT TTGGCAAGCG CTTTGGTTGG
ACTGGTGGGG TAAATCGGCG ATCAGTGTCA GAGCTGGTAA TCTCATTCGC AGTAGCCATG
CTGCGGCATG TGCCCGCAGC ACAAAAAGAG GTGTTGGCCG GCACTTGGCG GCAGCATGTA
GGCGGCTTGT TGTCGGGTCG CACGGTTGGC ATTGTCGGCT GTGGCTTTGT TGGAAAAGAT
TTGATTGAAT TGCTTCAGCC CTGGGGCTGC ACTGTGCTTG CGCATGACAT ACTTGACTTC
CCCGAGTTTT ACAAACGCCA TTCCGTTGTA CCAGTTGGTT TGGATGAGCT GCTGCAAAAG
TCTGATGTGG TGTCGCTCCA TTTGCCGTTG AATGACTCTA CTTCTAACAT GCTTTCAGCA
GAAAAACTTC AGTTACTAAA ATCAACCTCA ATATTGATTA ACGCTGCCAG GGGTGGCATT
GTTGATGAAA GTGCTTTAAA GGCTATGCTT ATAGAAAAAC GTCTGGCTGC GGCTGCCTTT
GACGTTTTTT CAGTAGAGCC GCCAGAGGAT CGTGAACTTG TCGCACTTCC TAACTTCCTA
GTGACACCAC ATATTGGGGG GAGCGCAGAA GAGGCGATTA TTGCCATGGG ACGTGCTGCC
ATTGATGGGC TGGATACAAA TGACATACCA TAA
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| Protein sequence | MNNTDKVAVC SRSFSKNPVL RAELLARYSQ VTFNDSGQQY EGDALVAFLR GHDKAITALE
KIDHAVLSQL PDLKVIGKYG VGLDMIDMAA MRHFGKRFGW TGGVNRRSVS ELVISFAVAM
LRHVPAAQKE VLAGTWRQHV GGLLSGRTVG IVGCGFVGKD LIELLQPWGC TVLAHDILDF
PEFYKRHSVV PVGLDELLQK SDVVSLHLPL NDSTSNMLSA EKLQLLKSTS ILINAARGGI
VDESALKAML IEKRLAAAAF DVFSVEPPED RELVALPNFL VTPHIGGSAE EAIIAMGRAA
IDGLDTNDIP
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