| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1242 |
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| Symbol | |
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| ID | 3961232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1337447 |
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| End bp | 1338217 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637916056 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_522507 |
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| Protein GI | 89900036 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGACAA TCGCCATTAT TCCGGCGCGG ATGGGGGCAT CGCGCTTTCC GGGCAAACCA
TTGCATCCCA TACTGGGTAT ACCTATGTTG GGGCACTGTT ACTTTCGCAC CCGTATGGTG
CCAGGCCTTG CAGAAACTTA TGTCGCTACT TGTGACCAAG AGATTGCTGA CTACGTTACG
TCCATTGGCG GTAAGGCCAT CATGACATCG CACAGCCACA ACCGTGCCAC AGATCGCACG
GCAGAGGCCA TGCTCAAAAT AGAGGTCGAA ACTGGCGACC GTGTTGATGT GGTCATCATG
GTGCAGGGGG ACGAACCTTT AATCTTGCCG GAAACCATTG GTGAAACCCT GCCGCATTTC
AATGACCCCA CTGTGGAGAT TGTCAACATC ATGTCTCGTT TGCGCACGCG TGAGCAGTTT
GAAGATAAGA ACAATGTCAA GGTGGTTGTT AACCAGCAAA AAGATGCGTT GTACTTTTCG
CGTGAGCCTA TCCCATCACC CTGGCGCGGC GTTGAACAGG TGCCCATGTA CATGCAAGTG
GGTGTGATTG CGTTTAGACG GGATGTAATC ATTCGTTTTA ATAGCATGCC TGAAACAACA
CTTGAAAAAA TTGAATCTGT CGATATGAAC CGCGTGCTTG AAACCGGTGG CCGAATTCGC
ATGGTACTAA CCGACGCTGT CACCATTGGT GTTGATACGC CGCAAGAGGC AGATGAAGTG
GGCCGACTAA TGCAGGGCGA TGCGTTGTTG ACCAAATATC CGCAGCCATG A
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| Protein sequence | MKTIAIIPAR MGASRFPGKP LHPILGIPML GHCYFRTRMV PGLAETYVAT CDQEIADYVT
SIGGKAIMTS HSHNRATDRT AEAMLKIEVE TGDRVDVVIM VQGDEPLILP ETIGETLPHF
NDPTVEIVNI MSRLRTREQF EDKNNVKVVV NQQKDALYFS REPIPSPWRG VEQVPMYMQV
GVIAFRRDVI IRFNSMPETT LEKIESVDMN RVLETGGRIR MVLTDAVTIG VDTPQEADEV
GRLMQGDALL TKYPQP
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