| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1239 |
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| Symbol | |
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| ID | 3961229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1334045 |
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| End bp | 1335151 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637916053 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_522504 |
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| Protein GI | 89900033 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.868639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCCTT TTCTTGATCT AAAAGCCCCA TATCTTGAAC TAAAAGAAGA GCTGGACGAT
GCCATTGCCC GCGTTGTTAG CTCTGGATGG TTTATCGGTG GACCTGAAGT AGATGCGTTC
GAGGCGGATT ACGCAACCTA CTGCGGTGCG ACCCACGCCG TGGGCGTAGC CAACGGCCTG
GATGCGCTGC ACCTAGCCCT GCGCGCCATG GATGTTGGGC CTGGTGACGA AGTCATCGTG
CCCAGCAATA CCTACATCGC CACTTGGCTA GCCGTGAGCC AGTGCGGGGC CACTCCAGTG
CCGGTGGAGC CCGATGCGCG CACCTACAAC ATGGATGCAA GCTTGATTGA AGCTGCCATC
ACCCCGCGCA CTAAGGTAAT ACTACCGGTG CACCTTTATG GTCAGCCAGC CGATATGGAT
TCGATTCTGA CGATTGCACA CAAACATGGT CTCAAAGTAC TGGAAGACGG TGCCCAAGCG
CATGGTGCAA AGTACAAGGG TAAACCCCTG GGCGCGCATG GTGATGCCGT GGCCTGGAGT
TTCTACCCCG GCAAGAACCT GGGTGCCATG GGCGACGGCG GTGTAGTGAC CACCAACGAC
GCGCAACTTG CTAACCGCAT CCGCGTGCTG CGCAACTACG GTTCGCGCGT GAAATATGTC
AACGAAGTGC AAGGCTACAA CAGCCGACTC GACCCACTGC AAGCAGCCAT CTTGAGCGTT
AAGCTAAAGC ATTTGGACGG ATGGAATACC CGGCGCAGGG TGTTTGGCAC CCGATACCAA
CAGGGTTTGG CTGACTGCAA GCTCACGATC CCTTTTGTCC CCAATTGGGC CGAACCCGTC
TGGCACCTTT ACGTGGTGCA ACACCCGCAA CGCGATACCT TGCAAAAGCA GTTGAGTGAT
GCAGGCATTG GCACAATGAT TCATTACCCC ATACCTCCAC ACCTTCAACA AGCCTATGCT
GGCCTATTGC ATGCACAGGG TAGTTTCCCA ATATCTGAGC AAATTCATAA AAATCTGCTG
AGCCTGCCAA TGGGGCCCGC CATGCGCTTG GAAGATGTAG ATATGGTTAT AGGTGCAGTT
CGTGTCATCG TTTCAGCATT GTCTTAA
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| Protein sequence | MIPFLDLKAP YLELKEELDD AIARVVSSGW FIGGPEVDAF EADYATYCGA THAVGVANGL
DALHLALRAM DVGPGDEVIV PSNTYIATWL AVSQCGATPV PVEPDARTYN MDASLIEAAI
TPRTKVILPV HLYGQPADMD SILTIAHKHG LKVLEDGAQA HGAKYKGKPL GAHGDAVAWS
FYPGKNLGAM GDGGVVTTND AQLANRIRVL RNYGSRVKYV NEVQGYNSRL DPLQAAILSV
KLKHLDGWNT RRRVFGTRYQ QGLADCKLTI PFVPNWAEPV WHLYVVQHPQ RDTLQKQLSD
AGIGTMIHYP IPPHLQQAYA GLLHAQGSFP ISEQIHKNLL SLPMGPAMRL EDVDMVIGAV
RVIVSALS
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