Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1238 |
Symbol | |
ID | 3961228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1333110 |
End bp | 1334048 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637916052 |
Product | WxcM-like |
Protein accession | YP_522503 |
Protein GI | 89900032 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.219256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTCAAC CTTTCATCCA CACCCTGGCC GACGTCCATT CCACCACCAT TGGTACCGGC ACACGTATCT GGCAGTTCGT TGTGGCGCTG GCCGGTGCCA AGATCGGCCA AGACTGCAAC GTCTGCTCGC ACTGCCTGAT TGAAAACGAC GTCGTCATCG GCGACCGCGT TACCGTCAAG AGCGGCGTGC AGCTGTGGGA CGGTTTGCGC GTGGGCGACG ATGTTTTTAT CGGTCCCAAC GCGTCGTTTG CCAATGATCG GTTTCCGCGC AGCAAGATAA CGCCTGAAAA GTTCCTGCAA ACGGAGGTGG AAAAAGGTGC GTCGATAGGC GCGGGTGCAA CCATCCTGCC AGGCATCACG ATTGGCCGCA ATGCCATGGT GGCCGCAGGT GCCGTGGTAA CTCGCTCAGT GCCGCCAAAC GCAATCGTCG TTGGCAACCC TGCCAAAATC GTCGGCTATG TTGACGCTGA CCGAAACAAG GGGGATATCG GCGAAGGCCA GGCTGTTATT GTTGGTGCAC AGGAAACTCA GGTTAGGGGC GTTTCACTGC ATCGCATGCC TCGGGTTATT GATATTCGCG GCAGCCTGAC GGTGGGTGAG TTTGATCGCA GCATCCCCTT CGCGGTGAAG CGCTATTTTA TGGTGTTTGA CGTGCCCAGC ATGGAAACCC GTGGTGAGCA TGCGCACCGT GTGTGCCACC AATTTTTGAT TTGTGTTCGT GGCTGTTGTG CGGTGGTTGC CGACGATGGC ACGCATCGCC AGGAGTTCTT GCTCGACAGG CCAGACGTGG GCATTCACCT GCCGCCCATG GTCTGGGGCA TTCAATATAA ATATTCAGCC GATGCCGTTT TACTGGTGTA CGCATCGCAC TACTACGACA ACGCAGATTA CATTCGTAAC TACTCAGAGT TTCGTCAATT GGTGGGAGCC TCGGCATGA
|
Protein sequence | MSQPFIHTLA DVHSTTIGTG TRIWQFVVAL AGAKIGQDCN VCSHCLIEND VVIGDRVTVK SGVQLWDGLR VGDDVFIGPN ASFANDRFPR SKITPEKFLQ TEVEKGASIG AGATILPGIT IGRNAMVAAG AVVTRSVPPN AIVVGNPAKI VGYVDADRNK GDIGEGQAVI VGAQETQVRG VSLHRMPRVI DIRGSLTVGE FDRSIPFAVK RYFMVFDVPS METRGEHAHR VCHQFLICVR GCCAVVADDG THRQEFLLDR PDVGIHLPPM VWGIQYKYSA DAVLLVYASH YYDNADYIRN YSEFRQLVGA SA
|
| |