| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1237 |
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| Symbol | |
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| ID | 3961227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1331945 |
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| End bp | 1333048 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916051 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_522502 |
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| Protein GI | 89900031 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.32967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCAAA AAACCGCCCT CATCACAGGC ATCACCGGCC AAGACGGAAG TTATTTAGCT
GAGTTCCTGC TAGAAAAAGG CTACATCGTG CACGGCATCA AACGCCGGGC CAGCTCGTTC
AACACCCAGC GCGTAGACCA CATCTACCAG GACCCGCACG TCAACAACGC CCACTTCAAG
CTGCACTACG GCGATCTGAG CGACACCAGC AACCTGGTGC GCATCGTGCA AGAAACACAA
CCTGACGAGA TCTACAACCT GGGCGCGCAA AGCCACGTGG CTGTGAGCTT TGAGAGCCCC
GAATACACCG CCGACGTGGA TGGCATGGGT ACCCTGCGTA TTCTGGAGGC CATTCGCATC
CTGGGCCTGG AGAAAAAAAC CCGTTACTAC CAGGCCTCTA CCTCCGAGCT ATATGGCCTG
GTGCAAGAAA CTCCGCAGCG CGAAACCACC CCCTTCTACC CGCGCAGCCC CTACGCCGTG
GCCAAGTTAT ATGCCTACTG GATCACGGTC AACTACCGTG AGGCCTACGG CATGTATGCC
TGCAACGGCA TCATGTTCAA CCACGAAAGC CCGCGCCGGG GTGAAACCTT CGTCACCCGC
AAAATCACCC GCGGCCTGGC CAACATCAGC CAAGGCCTGG AAGACTGCCT CTTCATGGGC
AACATCGACG CCCTGCGCGA CTGGGGCCAC GCCAAAGACT ACGTTCGCAT GCAATGGATG
ATGCTGCAGC AAGACAAGCC AGATGACTTT GTAATTGCCA CCGGCGTGCA ATACAGCGTG
CGCTCCTTTC TGGAATGGAC CGCCACCGCG CTGGGTATGC AGATCCGCTG GGAAGGCTCA
GGCGTCGAGG AAGTAGGCTA CGCAGTCGTC CCTGGCGCAT CGCGTGAGGC GGCAATAGTC
CGCATCGACC CTCGCTACTT CCGCCCCACC GAAGTCGAAA CCCTGCTGGG CGACCCCACC
AAAGCCAAAC AAAAACTAGG CTGGGTGCCT GAGATCACCG CGCAAGAAAT GTGCGCCGAA
ATGGTCGCCC ATGATCTGGT TGAAGCGAAA AAGCACGCTT TGCTCAAGCA GAACGGCTAC
AGCGTCAATG TGTGTATTGA ATAA
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| Protein sequence | MTQKTALITG ITGQDGSYLA EFLLEKGYIV HGIKRRASSF NTQRVDHIYQ DPHVNNAHFK
LHYGDLSDTS NLVRIVQETQ PDEIYNLGAQ SHVAVSFESP EYTADVDGMG TLRILEAIRI
LGLEKKTRYY QASTSELYGL VQETPQRETT PFYPRSPYAV AKLYAYWITV NYREAYGMYA
CNGIMFNHES PRRGETFVTR KITRGLANIS QGLEDCLFMG NIDALRDWGH AKDYVRMQWM
MLQQDKPDDF VIATGVQYSV RSFLEWTATA LGMQIRWEGS GVEEVGYAVV PGASREAAIV
RIDPRYFRPT EVETLLGDPT KAKQKLGWVP EITAQEMCAE MVAHDLVEAK KHALLKQNGY
SVNVCIE
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