| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1235 |
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| Symbol | |
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| ID | 3961225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1330447 |
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| End bp | 1331409 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916049 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_522500 |
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| Protein GI | 89900029 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAC AACCCAAAAT TTATGTCGCC GGCCACGGCG GCATGGTCGG CTCGGCCATC
GTGCGCACCC TGCAACAGCA GGGTCAGACC AACATCGTTA CCCGCACGCA CGCCGAGCTG
GACCTCACCA ACCAGGCAGC CGTACAGGCA TTTTTTGAAG AAGAAAAGCC AGATCAGGTC
TATTTGGCCG CCGCCAAGGT GGGCGGTATC CACGCCAACA ACACCTACCC GGCAGAGTTC
ATCTATCAAA ACCTGATGAT GGAGGCCCAC ATCATCCACA GCGCCTGGCG CAACGGCGTG
CAAAAGCTGT TGTTTCTGGG TTCGAGCTGC ATCTACCCCA AGCTTGCCGC CCAGCCCATG
CGTGAAGATG CCTTGCTCAC CGGCATGCTG GAGCCCACCA ACGAGCCCTA CGCCATCGCC
AAGATTGCCG GCATCAAGCT CTGCGAGAGC TACAACCGCC AATACGGCCA GAGCCACGGC
GTCGACTACC GCAGCGTCAT GCCCACCAAC CTCTACGGCC CCGGCGACAA CTACCACCCT
GAAAATAGCC ACGTCATCCC CGCGCTGATC CGTCGCTTTC ACGAAGCCAA GGTCAGCAAG
GCCCCCACCG TCACCATCTG GGGCACCGGC ACGCCGCGTC GTGAGTTTTT GTATGTGGAC
GACATGGCTG CTGCCAGCGT GCATGTGATG AATCTGGACC CAGCCATTTA CAGCGCCCAC
ACTCAGCCGA CGCAAAGCCA CATCAATGTC GGCTGCGGTT CAGACATCAC CATCGCCCAA
CTTGCCCAGG CCGTCAGCCA GGCCGTGGGG TACCAAGGCA ACATCGACTA TGACCCCACC
AAACCTGACG GCAGCCCGCG CAAGCTCATG GACAGCAGCC GCCTGAATGC ACTCGGCTGG
CGGGCCAAGG TGGCGTTGGA ACAAGGTCTG ATGCAAGCCT ACCAGGACTT CCTGCAACAC
TAG
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| Protein sequence | MTQQPKIYVA GHGGMVGSAI VRTLQQQGQT NIVTRTHAEL DLTNQAAVQA FFEEEKPDQV
YLAAAKVGGI HANNTYPAEF IYQNLMMEAH IIHSAWRNGV QKLLFLGSSC IYPKLAAQPM
REDALLTGML EPTNEPYAIA KIAGIKLCES YNRQYGQSHG VDYRSVMPTN LYGPGDNYHP
ENSHVIPALI RRFHEAKVSK APTVTIWGTG TPRREFLYVD DMAAASVHVM NLDPAIYSAH
TQPTQSHINV GCGSDITIAQ LAQAVSQAVG YQGNIDYDPT KPDGSPRKLM DSSRLNALGW
RAKVALEQGL MQAYQDFLQH
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