Gene Rfer_1230 details

Gene Information

• Locus tag: Rfer_1230
• ID: 3961220
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 1320533
• End bp: 1326028
• Gene Length: 5496 bp
• Protein Length: 1831 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637916044
• Product: hypothetical protein
• Protein accession: YP_522495
• Protein GI: 89900024

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGCCA TGGCCACCCG AGCACAGGAC ATCAGCTTCG TCATCCCGGG CCAGGCGCAG 
GCGGGCGGCG CCACCCGTGG CAGCAGCAAG GCCTCGGTGC GCGTTGGCGC GCAGCGCGGC 
GGTGCTGAGG CGGTGCGCGT GACCGCCCGC CCGGGCGAGG ACGTCGTGGT GCTGACCATC 
GCCAACGGGC CAACGCTGTA CCTGCACCCC GAAGACGCGC GCGACCTGAT GCGCGCGCAA 
AGCGCCGGTG CCACCCGCGG CACGGTCAAT GCGGCCGACG ACAGCGAAGT TGTGGTCTCT 
CCGCAGCTCG GCTGGCCGGG GCTGGAGGCG GGCGCCACGC GCGGCGCGAC CCGCGGCTGG 
ATGGGCCAGA CCGTGCTCAG CGCCTTCGAG CTCATCACCG GCCTGGCCAA AGACCCGGCG 
GCCAAACTGG CCGCCGCCGC CATCACCAGG AAAGTCGACG GTGCCGTGGA CGCGGGTGTG 
TACGAACTCT CGGCGACTGC GCTGGAGCCG CTCAAGGGCA GCGGCCGCAA GCGCGACGCG 
GTGCCGGCGG CAGCCGACGG CGGGCCGCTG CTGGTGCTGG TGCACGGCAC CTTCGTCGAC 
AGCGTCAGCA CCTTCGGCAA GCTCTGGACG CTGCACCCGC AGACCGTGCG CGCGCTGTTC 
CAGCACTACG GCGACCGGGT CTACGCGCTC GATCACCCGA CCCTGGGCCA GAGTCCGATT 
GCCAACGCCT TGACGCTGGT GCGCGCCGTG CCGGCCGGCG CGCGCCTGCA CCTGCTGACC 
CATTCGCGCG GCGGCCTGGT GGCCGAAGTG CTGGTGCGGG CCTGCGGCGG CAAGCCGCCT 
GGCAGCGAGG AGCTGGCCTT GTTCGACGGG GCCGACTACC GCCAGCAACG CGCCGATCTG 
CAGACCCTGG CCCAAGAGGC GATGGCCAAG GGCCTGAAGA TCGAACGCGT GGTGCGGGTG 
GCCTGCCCGG CGCGCGGCAC GCTGCTGGCG TCCAAACGCC TTGACGCCTA CCTGTCGGTG 
CTGAAGTGGA GCCTGGAGCT GGGCGGTGTG CCGGTGGCGC CGCAGCTGCT CGACTTCCTG 
TGTGAAGTGG CGCGCCGGCG CGCCCAGCCC GACGAGCTGC CCGGCCTCGA AGCCATGATG 
CCCGGCAGCC CGCTGGTGCA GTGGCTCAAC GGCGGCAGTG GCGACGGCGA CGCCCTCCCT 
GGCGAACTGC TCGTGGTGGC CGGCGACATG GAGGGCGACT CGATCGGCTC CTGGGTCAAG 
ACGCTGCTGT CCGATGCCTT CTACTGGACC GACAACGACC TGATCGTGCA GACGCGCTCG 
ATGTACGGCG GCGCGCCGCG TGCCGCCAGC GCCGCCGGCG CCGGGGCGAG TTTTGTGCTC 
GACCGCGGCG CCCGGGTCTC GCACTTCAAC TACTTCGCCA ACGAGAGCAC GGTCAATGCC 
ATCACGGATG CGCTGCTGGA GACGGCGCCG GCCGACTTCG CAACCATCGG CCCGCTGTCC 
TGGGCCGGCG AGGACGCCAG TGGCACCCGC GCCGCGCGCG CCGTGACGCG TTCGCGCGGT 
GCCAATGCGG CCGACGCGGC CAACCGCCCG GCAGTGTTCG TGCTGCCCGG CATCCTGGGC 
TCCAATCTCA AGCTCGACGG CAAGCGCATC TGGCTCGGTT TTCGCTTCGT CAACGGTCTG 
AAGAAGCTGG CGTGGGACCC GGCGACGGCC GCGCGCATCG AGCCCGACGG CCCGATCGGC 
AGTACCTACG ACGACCTGAT CGAGCGCCTG GCCGACAGCC ACGAGGTGAT CCCCTTCGCC 
TACGACTGGC GCCGCCCGAT CGAAGACGAA GCGCAGCGCC TGGCGGCAGC GGTGGATGCG 
GCGCTCGCCG CGCGCAACAC CAGCCAGCAA CCGGTGCGTC TGCTCGCGCA CTCGATGGGT 
GGGCTGGTAG CACGCACCAT GCGCCTGGAA AAACCCGACA CCTGGGCCCG CATGATGGCG 
CGTGAGGGCG CGCGCCTCCT GATGCTGGGC ACGCCCAACG GCGGCTCGTG GGCGCCGATG 
CAGACGCTCT CGGGCGACGA CACCTTCGGC AACGCGCTGG TCGCCTTCGG TGCGCTGTTC 
GACAACGGCG GCGCGCGCCA GATGATGGCC GGCCTGCCCG GCTTCATCCA GTTGCAGGCC 
GCACTGCTCG ACCCCACGCT CGGCCTCGAT AAGTCCAGCA CCTGGCAGAA GCTGGCCGAC 
CAGGACATGG CGGCGCTGCG TGAGCGCAGC ATCTGGCACG ACGAGGGCGC GCAGCGCACC 
ATCTACGAGT GGGGCGCACC GCCGCAAGCG GTGCTCGACC AGGCCGTGCA ATTGCGCCGG 
CGCCTGGATG CGCAGGTCGA AACCCTGGGC GCCGATGCGC CGAAGATGCT GCTGGTAGTC 
GGCCACGCAC GCTTCACACC GGCTGGCATC ACACAGACCA CCGACGGCCT CGAGTACCTC 
GACGCGCCGG ACGACGGCGA CGGCCGCGTC ACGCTGGCGA GCGCACTGCT GCCGGGCGTG 
CGCACCTGGA AGGTCGATGC CGAACACGGC AAGCTGCCCG ACGAAGCGAG CGCCTTCGCG 
GCCTACATCG AACTGCTCAG CAGCGGCCAG ACCACCCAGC TGGAAATCGT GGAGTCCGCC 
GCCCCCGGCG TGCGCGGCGC CGCCGGTGCG GCCGCAGCCG TGGCGGCGCT GGTGCGCAAC 
CGGCCTTCGC GCGGGCTGCA ATCGTCGCGC CCACCGTCGA GCGAAGCCGA GGTGCTGGAC 
CTGGCGCGCA GCGATACCGA AGCCCGCAGC GCACGAGGCA AAAGCACGGC GCTGCGCGTG 
TCGGTGTACA ACGGTGACAT CAAGTTCGTC AGCCAGCCGC TGCTGGTCGG GCACTACCGC 
TCGCTGGCGC TGACCGGGAC CGAGTGGGTC GTTGATGGCC TCGTCGGCCA CGCCATGAGC 
AAGTCGCTCG CGGCCGGCCT GTACCCCGAC GCCACCGGCT CGCACCAGAT CTTCGGCAAC 
CAGCGCCATG ACCCGGAGAA TGTGTTCGCC ATGGCGCGCC CGCAGGCGGT GGTGGTGGCC 
GGACTGGGTG AAGAGGGCAA GCTGCGCGCG AGTGAACTGG TCTACACCGT GCGCCAGGCG 
GTGCTGGCGT ATGCGCAGCG GGTGTCGGAG CAGGGCGGCG TGGCGCAGTT CGAACTGGCA 
GCCACGCTGA TCGGCAGCGG CGGCACCGGC ATCAGTGCCG GCAGCTCGGC GCAATTGATC 
GCGCAGGGCG TGTTCGAGGC CAGCCAGAAA TTGCAGCAGG GCGGCTGGCC GCAGCTGAGC 
CGCCTGATCC TGGTGGAGTT CTACCTGGAC CGCGCCAGCG ACGCCTGGCG CTCGCTGCAG 
GTGCAATCGA CCGCCACGCC GAACCAGCTG GAGCTGGTGG GCCTGATCAC CTCGGGCGAC 
GGTGCCCTGC GGCGTTCGCT CGATTCGAGC TACCGCGGCG CCGCCCACGA CCTGATCAGC 
GCCCTGACCG GCCCGCACGA CAAGAACGAC CAGCCGACGA TCCAGTATGT GCTCGACACG 
CGGCGCGCCC GCACCGAAGT GCGGGCCCAG CAGGCACAGG GCACGCTGCT CAGGGAGCTG 
GTGGCCAAGG CCTCGAACGA CTCGAACCGC GATGCGCAGA TCGGGCGCAC GCTGTTCAAG 
TTGCTGGTGC CGGTGGAGAT GGAGCCGTTC CTGGGTGGCA CCTCCGAGAT GCTGATCGAG 
CTCGACGCCG GCTCGGCCGT GATCCCCTGG GAACTGCTCG ACACCGATGC GCCGGCGCAC 
AGCGGCGGCG ACCCGCGGCC CTGGGCGATC CGCAGCAAGC TGCTGCGCAA GCTGCGCACC 
GAAGATTTTC GGGCCCAGGT GTCGGATGCC AACGCCGACG ACAGCGTGCT GGTGATCGGC 
GAGCCGCTGA GCGACCCCAC GCGCTACCCG CCGCTGCCCG GCGCCCGGGC CGAAGCCATC 
GCGGTCATGA CCCGGCTCAC CAGCGCTACC GATGGGATTC AGTCGGGCAA GGTGCGTTCG 
CTGGTCAGCG GCGAAGACGA TGCGCGCAGC GTGATCAACG CGCTGTTCGA GCGCCCCTAC 
CGCGTCGTGC ATGTCGCCGG CCATGGCGCC CCCGGCGCCC GCGGCGGCGT GGTGCTGTCG 
GGCGACACTT TTTTGGGTGC CGCCGAGATC AAGGCCATGC GCGTCGTGCC CGAGCTGGTG 
TTCCTGAACT GCTGCCACCT GGCCGGGCGC GACGCCTCGC TGACGCTGCA GCCCTACGAC 
CGCGCGAGTT TTGCGGCCAA CATCGCGCAG GCGCTGATCG AAGTCGGCGT GCGCTGCGTG 
ATCGCCGCCG GCTGGGCCGT GGAGGACGGG CCGGCCGAAA AGTTCGCCAC CACCTTCTAC 
GCGGTGCTGT TGCGCGGCGA GCGTTTCATC GACGCCGTCG CGGCGGCGCG TGAAGCGGCC 
TGGCGCGAGA GTCCGCAGGG CAATACCTGG GCTGCCTACC AGTGTTATGG CGACCCGGGC 
TGGACCTGGC GCCGCGGCGG CGCCGACGCC CAGCGCAAGG CGCCACCGGT GGGCGACGAG 
TTCGTGGCGG TGTCGTCGCC GGTGGCGCTG GCGCTGGCAC TCGAAACCCT CGCCATCCGC 
AGCCGTTTCA GCCAGGTCAA AGCCGAGTTG CAGTGCGACA AACTGCATTT TCTCGAATCG 
AAGTTCGGCC CGCCCTGGGG CGCCATGGGC GCTGTCGCGG AGGCTTTCGG CCTGGCCTAT 
GCCCAGGCCC AGGACAGCGC CAAGGCGATC GAGTGGTACC GCGTGGCGGT CCATGCGGCG 
GATGGCAGCG CCTCGTTCCG GGCCGCCGAA CAACTCGGCA ATCAGCTGGC GCGCTACGGC 
GAGGGCCTCA GCGATGCGGC GCGCGCGCGC CGGTTGATCG AGGAAGGCAT CGCGCAGCTC 
AGCCGGCTGG TCGCGCTGCA AGCCACCTTT GAGCGCGAGA GCCTGCTTGG TTCCGCATGG 
AAGCGCCTGG TGTTGCTTGA AACCCGTACC GGCAACGCGG GCGCCTCGCT CCAGGCGCTG 
GAGCAAATGG CGGCGCACTA TGCCAACGCA GAGACCCTGG CCCGCCAGGG GCAGGCCGCC 
AATCTGTTCT ACCCGGCCAA GAACTGCATC AGTGCCGAGC TGCGGCTGGC GTTCTTGCAT 
CGGCGCGCGC CGCGGCTGGC GGCGGACCGG CTGCGTGCGG TGCGTGAATC GCTGGACCAG 
GCAAGCATGG AGAAGCCTGA TTTCTGGTCG GTGGCCGGGC AAACCGAGCT GGGTCTGCTC 
GAGGCCCTGG CGCAAGGCCG CCTGGCGGGC TCCGGGCCTG CGTTGATGGA TGCCTTTCGA 
GAGCTCAAGC TGCGCGTGCC AGCCACGTCG AGCTGGGACT CGGTCTACAC GGATGCGCGC 
TTCACGCTGG AACCCTATCA GCGGGTTGCC AGTGCGCCCG AGCAGCGCGC TGCGGTCGAG 
CTGTTGAATG GCCTGAAGGC GCTGGCGGCC GCATGA 

 

Protein sequence

MLAMATRAQD ISFVIPGQAQ AGGATRGSSK ASVRVGAQRG GAEAVRVTAR PGEDVVVLTI 
ANGPTLYLHP EDARDLMRAQ SAGATRGTVN AADDSEVVVS PQLGWPGLEA GATRGATRGW 
MGQTVLSAFE LITGLAKDPA AKLAAAAITR KVDGAVDAGV YELSATALEP LKGSGRKRDA 
VPAAADGGPL LVLVHGTFVD SVSTFGKLWT LHPQTVRALF QHYGDRVYAL DHPTLGQSPI 
ANALTLVRAV PAGARLHLLT HSRGGLVAEV LVRACGGKPP GSEELALFDG ADYRQQRADL 
QTLAQEAMAK GLKIERVVRV ACPARGTLLA SKRLDAYLSV LKWSLELGGV PVAPQLLDFL 
CEVARRRAQP DELPGLEAMM PGSPLVQWLN GGSGDGDALP GELLVVAGDM EGDSIGSWVK 
TLLSDAFYWT DNDLIVQTRS MYGGAPRAAS AAGAGASFVL DRGARVSHFN YFANESTVNA 
ITDALLETAP ADFATIGPLS WAGEDASGTR AARAVTRSRG ANAADAANRP AVFVLPGILG 
SNLKLDGKRI WLGFRFVNGL KKLAWDPATA ARIEPDGPIG STYDDLIERL ADSHEVIPFA 
YDWRRPIEDE AQRLAAAVDA ALAARNTSQQ PVRLLAHSMG GLVARTMRLE KPDTWARMMA 
REGARLLMLG TPNGGSWAPM QTLSGDDTFG NALVAFGALF DNGGARQMMA GLPGFIQLQA 
ALLDPTLGLD KSSTWQKLAD QDMAALRERS IWHDEGAQRT IYEWGAPPQA VLDQAVQLRR 
RLDAQVETLG ADAPKMLLVV GHARFTPAGI TQTTDGLEYL DAPDDGDGRV TLASALLPGV 
RTWKVDAEHG KLPDEASAFA AYIELLSSGQ TTQLEIVESA APGVRGAAGA AAAVAALVRN 
RPSRGLQSSR PPSSEAEVLD LARSDTEARS ARGKSTALRV SVYNGDIKFV SQPLLVGHYR 
SLALTGTEWV VDGLVGHAMS KSLAAGLYPD ATGSHQIFGN QRHDPENVFA MARPQAVVVA 
GLGEEGKLRA SELVYTVRQA VLAYAQRVSE QGGVAQFELA ATLIGSGGTG ISAGSSAQLI 
AQGVFEASQK LQQGGWPQLS RLILVEFYLD RASDAWRSLQ VQSTATPNQL ELVGLITSGD 
GALRRSLDSS YRGAAHDLIS ALTGPHDKND QPTIQYVLDT RRARTEVRAQ QAQGTLLREL 
VAKASNDSNR DAQIGRTLFK LLVPVEMEPF LGGTSEMLIE LDAGSAVIPW ELLDTDAPAH 
SGGDPRPWAI RSKLLRKLRT EDFRAQVSDA NADDSVLVIG EPLSDPTRYP PLPGARAEAI 
AVMTRLTSAT DGIQSGKVRS LVSGEDDARS VINALFERPY RVVHVAGHGA PGARGGVVLS 
GDTFLGAAEI KAMRVVPELV FLNCCHLAGR DASLTLQPYD RASFAANIAQ ALIEVGVRCV 
IAAGWAVEDG PAEKFATTFY AVLLRGERFI DAVAAAREAA WRESPQGNTW AAYQCYGDPG 
WTWRRGGADA QRKAPPVGDE FVAVSSPVAL ALALETLAIR SRFSQVKAEL QCDKLHFLES 
KFGPPWGAMG AVAEAFGLAY AQAQDSAKAI EWYRVAVHAA DGSASFRAAE QLGNQLARYG 
EGLSDAARAR RLIEEGIAQL SRLVALQATF ERESLLGSAW KRLVLLETRT GNAGASLQAL 
EQMAAHYANA ETLARQGQAA NLFYPAKNCI SAELRLAFLH RRAPRLAADR LRAVRESLDQ 
ASMEKPDFWS VAGQTELGLL EALAQGRLAG SGPALMDAFR ELKLRVPATS SWDSVYTDAR 
FTLEPYQRVA SAPEQRAAVE LLNGLKALAA A