| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1227 |
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| Symbol | |
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| ID | 3961217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1314126 |
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| End bp | 1317380 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637916041 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_522492 |
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| Protein GI | 89900021 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTGTT CGCTTGAAAC GGTCGTGCCC GCGACTGAGC CGGCCTCCGT GCCGGCCTAT
TGCGAGTTGC ATTGCCTGTC CAACTTCAGC TTTGGGCGCG GTGCCTCGCA CCCGGAAGAG
CTGGTCGCGC GTGCGGCAGC CCTGGGTTAC GCGGCGCTGG CCCTGACCGA CGAGTGCTCG
GTGGCGGGCG TGGTGCGCGC GCATACCGAG GCGAAAAAAC TGGGTTTGAA GTTGCTGCCC
GGGGCCGAGT TTGCGGTGAC GCAGGCTGAT GGGGCCGGCG GCGGCGCGCT TGAGGCCGGT
TTTCGGCTGG TGGCGCTGCC GCACGATCTG CAGGCCTGGG GCGACCTGTG CGAGTTCATC
ACCCAGGCGC GCCGGGCCGC GCCCAAAGGC CAGTATCGGC TGCTCTGGCA GGACGCCCCC
TGGGCGCTGC TGGGCGGTTG CGAGGTCTTG CTGGGGCTGC CGTCTGCTCT TCATTTCGAA
GCTGCTTGCG CAATAACGAC GAGGGCTAGA GCCCTGTTTG GCTCAAATTT GTGGCTGCTG
GTCGAGTTGC TGCTGGCGCC TGATGACACG CTGCAGGGGC AGCGGCTGCA ACAACTGGCC
CGTCTCACCG GCGTGCCGCT GGTGGCGGCC GGCAACGTGC ACATGCATGT GCGCTCGCGC
AAGCCGCTGC AGGATGTGCT CAGCGCCGTG CGGCTGGGCC AGCCGGTGTT TGACTGCGGC
CGCGCGCTGC AGCCCAACGC CGAAGCGCAC CTGCGCTCGC GCCAGCGCCT GGCCGCCATT
TATTCGCCCG ACGTGCTCGC CAACACGCTC ACCGTGGCGG CACGCTGCAC CTTCAGCCTT
GATGAGTTGC GCTACCAGTA CCCGCTGGAG ACGGTGCTTG AGGGCTTGTC AGCGGCGCAA
ACCCTGCGCC GCTACGCCGC CGAGGGCGCG CTCAATCGCT ACCCGCAGGG CACGCCGGCA
TCTGTGCAGC AGCAGCTCGA CCACGAGCTG GCGCTGATCA CGGAACTCCA CTTTGAGATG
TATTTTTTGA CCGTGCACGA CATCGTTCGC TTTGCGCGCA GCCGCCACAT CCTGTGCCAG
GGCCGCGGCT CGGCCGCCAA CTCGGCGGTT TGCTACTGCC TGGGCGTGAC CGAGGTGGAT
CCTTCGCGCA TGAACATGCT GTTTGAGCGT TTCATCTCCA GGGAGCGCAA CGAGCCCCCT
GATATCGACG TCGATTTTGA GCACCAGCGG CGCGAAGAGG TGATCCAGTA CATCTACGCC
AAGTATGGAC GTGAGCGCGC CGCTTTGAGC GCCGTGGTCA TCAGCTACCG TCCGCGCAGT
GCCTTGCGCG ATGTGGGGCG CGCGCTGGCT GTTCCCGAGG CGCTGATCAG CGCGCTGGCC
AAAGAGCATC CCGGCATGTA CAGCCGCACG GTGCTGGTTG AGCGGCTGCA GTCAGCGCTG
GCGCTGCTGG CGGCAGACGT GGCGCCACCC GCTGAATGCC TGCAGCTTTG GCTCGATCTG
AGCACCCAGT TGCAGCGTTT CCCGCGCCAC CTGAGCCAGC ATCCGGGCGG CTTTGTGCTC
ACCCGCGGCA AACTCACCCG GCTGGTGCCG GTGGAGAACG CCGCCATGCC GGAGCGCAGC
ATCATCCAGT GGGACAAGGA TGATCTGGAC GCCATGGGGC TGCTCAAGGT GGACGTGCTG
GCGCTGGGCA TGCTCAGCGC CATCCGCCGC TGCCTGGACC TCATCAGCGT GCAGCGCGGC
ACGCCGTTTT CAATGCAGGA CATCCCTCCG GAAGATCTGG CCACCTATGA CATGATTTGC
CAGGCCGACA CCGTGGGCGT GTTCCAGATC GAGAGTCGCG CGCAGATGAG CATGTTGCCG
CGCTTGAAAC CGCGTTGCTT TTACGATCTG GTGGTGGAGG TCGCGATCGT GCGCCCGGGG
CCGATTCAGG GCGGCATGGT GCACCCCTAC CTGAAAGCGC GCGAGCACCC CGAGCAGGTG
CCATACCCCA GCCCGGCCCT GCAAGAAGTT CTGAAACGCA CGCTGGGCGT GCCTATTTTT
CAGGAGCAGG TGATGCAGAT CGCCATGGCG GCGGCTGACT TTTCAGCTGG TGAGTCCGAC
AGCCTGCGCC GCTCCATGGC GGCCTGGAAG CGCCAGGGCG GTGTCCACAA GTTTTACGAC
CGCCTGGTCG GCGGCATGCT GAAGAACGGC TATAGCCTTG AGTTCGCCGA GCAGATCTTC
AAGCAGATCG AAGGCTTTGG CGAATACGGC TTTCCCGAGA GCCACGCCGC CAGCTTTGCC
CTGCTGGTGT ATGTGAGCAG CTGGCTCAAA CGCCATCAGC CCGCCTGTTT TCTGGCCGCC
CTGCTCAACA GCCAGCCGCT GGGCTTTTAC AGCCCGTCGC AACTGGTGCA GGACGCGCAG
CGCCATGGCG TCGGGGTGCG CCCGGTCGAC GTGACCCGCA GTGACTGGGA TTGCACGCTG
GAGCCAGCGA AGTCAACCAA GCTTTTGGGC TCAGACCCCA ATAGCGGTGC CGCTCAATTA
CCAGACGTGT GCAGATCGCC CTTCGTGCGC CTCGGTCTGC GCCAGGTCAG CGGTCTGTCT
GAATCGGCCG CCCAGCGCAT CGTGGCGGCG CGTGTTGAGG CCCCGTTCAC CAGCACCGAA
GACCTGGCCT TGCGCTGCGC GCTGGAGGCG GGCGACCTCA AGGCGCTGGC CAGTGCCGAC
GCGCTCGCCA GCCTGTCAGG CCACCGGCGC CAGCAGGTGT GGGATGCGGC GGCGCAGCAG
AACGCGCCCG GCTTGCTGCG GGCGGTGCCG GTGGCAGAAG CGGCGTTGCA ACTCCCCGCT
GCCAGTGAGG GCGAAGAAGT GATCTTCGAC TACGCCGCAC TGGGGCTCAC TTTAAGGTCG
CACCCCTTGT TGCTGTTGCG CGAGCAGCTA TCAAAAATGA GGCTGATGAC CGCGGCGCAA
CTGCGCGACC TGCCCAACGG CCGGCTGGCG CGCGCCTGCG GAATCGTCAC CATGCGCCAG
CAACCGCAAA CCGCCAAAGG TGTGATTTTC GTCACGTTGG AGGACGAGAC CGGTCAGGTC
AATGTGATTG TGTGGAAGTC CTTGAAAGAG CGGCAACGCC CGGCGCTGCT GCGCTCGCGC
CTGCTGGCGG TCTATGGCAC CTGGCAGCGC GATGTCGAGA GTGGTGGTGA CGTCTGCCAC
CTGATCGCCG GCCACCTGCA GGACCTGACG CCGCTGCTGG GCGGCTTGAC GACGCAGAGC
CGGGAGTTTT GTTGA
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| Protein sequence | MACSLETVVP ATEPASVPAY CELHCLSNFS FGRGASHPEE LVARAAALGY AALALTDECS
VAGVVRAHTE AKKLGLKLLP GAEFAVTQAD GAGGGALEAG FRLVALPHDL QAWGDLCEFI
TQARRAAPKG QYRLLWQDAP WALLGGCEVL LGLPSALHFE AACAITTRAR ALFGSNLWLL
VELLLAPDDT LQGQRLQQLA RLTGVPLVAA GNVHMHVRSR KPLQDVLSAV RLGQPVFDCG
RALQPNAEAH LRSRQRLAAI YSPDVLANTL TVAARCTFSL DELRYQYPLE TVLEGLSAAQ
TLRRYAAEGA LNRYPQGTPA SVQQQLDHEL ALITELHFEM YFLTVHDIVR FARSRHILCQ
GRGSAANSAV CYCLGVTEVD PSRMNMLFER FISRERNEPP DIDVDFEHQR REEVIQYIYA
KYGRERAALS AVVISYRPRS ALRDVGRALA VPEALISALA KEHPGMYSRT VLVERLQSAL
ALLAADVAPP AECLQLWLDL STQLQRFPRH LSQHPGGFVL TRGKLTRLVP VENAAMPERS
IIQWDKDDLD AMGLLKVDVL ALGMLSAIRR CLDLISVQRG TPFSMQDIPP EDLATYDMIC
QADTVGVFQI ESRAQMSMLP RLKPRCFYDL VVEVAIVRPG PIQGGMVHPY LKAREHPEQV
PYPSPALQEV LKRTLGVPIF QEQVMQIAMA AADFSAGESD SLRRSMAAWK RQGGVHKFYD
RLVGGMLKNG YSLEFAEQIF KQIEGFGEYG FPESHAASFA LLVYVSSWLK RHQPACFLAA
LLNSQPLGFY SPSQLVQDAQ RHGVGVRPVD VTRSDWDCTL EPAKSTKLLG SDPNSGAAQL
PDVCRSPFVR LGLRQVSGLS ESAAQRIVAA RVEAPFTSTE DLALRCALEA GDLKALASAD
ALASLSGHRR QQVWDAAAQQ NAPGLLRAVP VAEAALQLPA ASEGEEVIFD YAALGLTLRS
HPLLLLREQL SKMRLMTAAQ LRDLPNGRLA RACGIVTMRQ QPQTAKGVIF VTLEDETGQV
NVIVWKSLKE RQRPALLRSR LLAVYGTWQR DVESGGDVCH LIAGHLQDLT PLLGGLTTQS
REFC
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