| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1220 |
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| Symbol | |
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| ID | 3963545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1306461 |
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| End bp | 1307699 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637916034 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_522485 |
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| Protein GI | 89900014 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.636062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTG ACGCGCAACA ACTCTGGCGG GCGCCGCGCT GGGCGCTGGC GGTGCTGCTG
GCGGTGCTGG GCATGCTGGG ACCGTTCTCG ATTGACACCT ATATACCGGC TTTTTCCGGC
ATCGCCCAAT CGCTGGGCGC GACGCCGGTG CAGATGCAGC AAACGCTCTC GGCCTACCTG
TTCGGCTTTG CTTTCATGAG CCTGTTTCAC GGCGCGATTT CCGATAGCGT GGGGCGCCGA
CCGGTGGTGT TGTGGGGCCT GGCGGCCTTC ACGCTGGCCT CCATGGGCTG CGCCCTGTCG
CAAAGCATTG GCCAGTTGGT GTTCTTTCGG GCCGTGCAGG GCCTGACCAC GGGCGCCGGC
ATTGTGGTCT CAAGAGCCGT CGTGCGTGAC ATGTTTGCGC CGGCGCAGGC ACAAAAGGTG
ATGAGCCAGA TCACCATTTA TTTCGGCGTG GCGCCGGCCA TTGCGCCCAT CATTGGTGGC
ACCCTGTTTG TGCACTTGGG CTGGCACAGT GTGTTCTGGT TTCTGACCGC GGTGGGCGTG
TTGCTGTGGG TCGCCAATTA CAAGCTCCTG CCCGAAACCC TGCACCTCAC GCAACGTCAG
CCGCTCAAGG TCAGCAATCT GCTGCAGGGC TACTGGCAGC TCGGGCTCGA CCCGCGCTTT
TTGCTGCTGG CGCTGGCCAG TGGCGTGCCG TTCAACGGCA TGTTTTTGTA CGTCTTGTCG
GCGCCGGCTT TTTTGGGTGG GATTTTGGGT TTGGCGCCGA CGCAGTTTTT CTGGTTTTTT
GTACTCACCA TCAGCGGCAT CATGGGCGGC GCCTGGGTCA GCGGCCGCAT GGCGGGCAAA
CTGGCGCCCA AGCAGCAAAT CAAGTACGGT TTGTTGATCA TGCTGCTGAT CGCCAGCCTG
AATCTGGTGG CCAACTGGCT TTTCAAGGCG CACGTGGCGT GGTCGCTGTT CCCGATTGCC
ATCTTCGCCT TTGGCTGGGC CATGATGGTG CCGGTGATCA CCCTGCTGGT GCTCGATCTG
CATCCGGAGC GTCGTGGCAT GGCCTCAAGC TTGCAGGCCT TTATTGCCTC CTCGGCCAAT
GGACTGGTGG CCGGTCTCAT TGCGCCGCTG GTGATGCATT CAGCCGTGTC ACTGGCTGTC
GCTTCTCTAA GCATGATGTG TGTCGGTCTG TTCGCCTGGC TCTATCTGCA CCGCCGCTGG
CCCGATATTG GCCGGGTGGT GGAACATCCG GCGCATTGA
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| Protein sequence | MNPDAQQLWR APRWALAVLL AVLGMLGPFS IDTYIPAFSG IAQSLGATPV QMQQTLSAYL
FGFAFMSLFH GAISDSVGRR PVVLWGLAAF TLASMGCALS QSIGQLVFFR AVQGLTTGAG
IVVSRAVVRD MFAPAQAQKV MSQITIYFGV APAIAPIIGG TLFVHLGWHS VFWFLTAVGV
LLWVANYKLL PETLHLTQRQ PLKVSNLLQG YWQLGLDPRF LLLALASGVP FNGMFLYVLS
APAFLGGILG LAPTQFFWFF VLTISGIMGG AWVSGRMAGK LAPKQQIKYG LLIMLLIASL
NLVANWLFKA HVAWSLFPIA IFAFGWAMMV PVITLLVLDL HPERRGMASS LQAFIASSAN
GLVAGLIAPL VMHSAVSLAV ASLSMMCVGL FAWLYLHRRW PDIGRVVEHP AH
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