| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1207 |
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| Symbol | |
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| ID | 3963532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1293947 |
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| End bp | 1294444 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637916022 |
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| Product | aspartyl protease-like |
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| Protein accession | YP_522473 |
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| Protein GI | 89900002 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0487674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTCAA AAGCCGCGTC ACCGACAAAG ACCGGGCTCA TTCCGATGAT GATCTTTTGG
TTTGCGGTCA TGGGGCTTTT GTACGTGTTG ATGACGCACT ATCTAAAGCC CAAGCAAGCG
CAGGTGCTGG CCAACGGTGA TTTGGTGATC AACAGGTCAC AGGACGGCCA TTTCTACACC
GCGGGCATCA TCAACGGCAA AGAGGTCAAG TTCATGGTTG ATACCGGGGC ATCCCTGGTG
AGTGTGAGTG AAAAGTTTGC CCAGAAGGCG TTCATTCTCG GCGGCGTGCC CACTACATTC
AAAACGGCAA ATGGTGATCG ACGCGGGCGC GTTGTGGAGG GTGTGGGCGT GTCCGTGGGA
CCTGTAAACG TCACCAACGT CAAAGTAGGC GTTGGCCTGA GCCTTGGCAA TGAAGACGAG
GCTCTATTGG GTCAGTCGTT CCTGTCGAAA TTTGACATCT CAATGAACAA GAACCAGATG
GTGCTGCGGT CGAGGTGA
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| Protein sequence | MTSKAASPTK TGLIPMMIFW FAVMGLLYVL MTHYLKPKQA QVLANGDLVI NRSQDGHFYT
AGIINGKEVK FMVDTGASLV SVSEKFAQKA FILGGVPTTF KTANGDRRGR VVEGVGVSVG
PVNVTNVKVG VGLSLGNEDE ALLGQSFLSK FDISMNKNQM VLRSR
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