| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1206 |
|---|
| Symbol | |
|---|
| ID | 3963531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1292342 |
|---|
| End bp | 1293568 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637916021 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_522472 |
|---|
| Protein GI | 89900001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.208797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAA GAAGCGTCCG CAGGTTATTT GCCCACCGTC AATTCATGCG CTTTTGGTTC
TCCAGACTTG CCGGCGTGAG CGCCAATCAA ATGTTGATGG TGGGGGTGGC CTGGCACATG
TATGACATCA CCTCCAGTGC CTGGGATCTC GGTTTGGTGG GATTGTTTCA GTTTGTACCT
GCCCTTGTTC TGATGCTGCC TGCAGGGCAC ACTGCCGACC GATTTCATCG AGGTCGCATC
TTTGCGGCCT GCATGGGCAT TCAGGCGGTG GTGGCGTTGG CGCTGATCTT CGCCACCCAG
TTCCACTTTG CCTCACGCGA GTTGATTCTT GGCATTTCGG TGTTGTTGGG GGTGGCTCGT
GCCTTCCAGA TGCCAGCACA ACAGGCATTG ACCCCTCAGC TTGTGCCGCA GGACATGCTG
CAAAGTGCGC TAGCTTTGAG CTCCAGCGGC ATGCAGGTGG CCATCATTGG TGGACCAGCA
CTTGGCGGCA TGCTGTACAC GACAGGGGCC ACAACCGTCT ATGTCACTTG CGCTCTCCTG
CTTCTGGTGT CTGCCATGCT GGCCTTGCTG GTGCGCTACC AGCACCAGCA AGCCCATCTG
GCCGCCACCT GGCAGACTGT TCTCGCTGGA TTCACCTTTG TCTGGCACCG CAAGGTCTTG
CTGGGTGCAA CTTCACTGGA CTTGTTTGCG GTGCTGCTCG GTGGTGCCAC GGCCTTGCTG
CCGATTTATG CACGGGACAT CCTGCATACC GGGCCAATCG GGCTAGGGGT GTTGCGATCT
GCTCCGGCCG TGGGTGCACT GATGATGTCG CTGGCGATCA TGCGCTGGCC GCTGACCAGA
CACGTGGGGC GCCGGCTGTT GGCGGCTGTT GCCATTTTTG GCGTGGCCAC CATTGTCTTT
GGACTATCCA GCCATTTTGG GCTGTCGCTG GTGGCACTGG CGATTGCCGG GGCCGCCGAC
AGCATCAGCG TGGTGACGCG ATCAACCCTG GTTCAGTTGG AAACACCCAA CGAGATGCGG
GGCCGGGTGT CGGCGGTCAA CTCGATGTTC ATTGGTGCCT CCAACCAGTT GGGGGAATTC
GAGTCGGGAG CCACTGCAGC CCTGTTTGGC GCGGTGGGCT CTGTGGTCAT TGGAGGTGTC
GGTACGGTAT TGATTGCTGC GGGATGGTTC AGGCTGTTTC CGGCGCTGGC AAGGCGGGAT
CGGATGGGGC CGACGGTTGC TGCTTGA
|
|---|
| Protein sequence | MSKRSVRRLF AHRQFMRFWF SRLAGVSANQ MLMVGVAWHM YDITSSAWDL GLVGLFQFVP
ALVLMLPAGH TADRFHRGRI FAACMGIQAV VALALIFATQ FHFASRELIL GISVLLGVAR
AFQMPAQQAL TPQLVPQDML QSALALSSSG MQVAIIGGPA LGGMLYTTGA TTVYVTCALL
LLVSAMLALL VRYQHQQAHL AATWQTVLAG FTFVWHRKVL LGATSLDLFA VLLGGATALL
PIYARDILHT GPIGLGVLRS APAVGALMMS LAIMRWPLTR HVGRRLLAAV AIFGVATIVF
GLSSHFGLSL VALAIAGAAD SISVVTRSTL VQLETPNEMR GRVSAVNSMF IGASNQLGEF
ESGATAALFG AVGSVVIGGV GTVLIAAGWF RLFPALARRD RMGPTVAA
|
|---|
| |