| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1202 |
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| Symbol | |
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| ID | 3963527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1286596 |
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| End bp | 1289934 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916017 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_522468 |
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| Protein GI | 89899997 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCCT TTCAGCGTGC ACGAGAGCAA GCAGTCGCTC TGCGAAGGAA GCTCCTCGAC
GACCGTGCGG GTGAGGCAGT GCACGTCAGT GAGTTCCTGA CGCCCGACCC AATTGCGGCG
AAGCTTTCCC TGGGAGTCGA ATATGTTCCG AAAGGCGCTG CGGAACTCTC GAACGGGGAT
GCCATCCTCA GACGCAAGGA AGACTATATC TACGTCCGTA AGGATATCGG TGTAGCTGAG
CAGGCTTACC TAGTCGCTCA TGAGCTTGGC CACTTTATTC TCGACGAGTC GCAGGAAGAA
GTCGCAATAG CCTCGTTGAG CTCGCTGACC GACGCTGAGG GCACACCGGC AGTTATCTCA
GTCGAAGCCT ATGGGGCGCG CGAACGGTTG GAGCTCAGAG CGAACGTCTT TGCGCGCGAG
CTTATGCTTC CGCGTGAGGT TGCGCGCGTG CTACATGACG CCGGTGTCGG ACCCCGGAAG
GCCGCACGCG ACTTGGGCAT CCACCTCGAA ATCGTGCGTC AGCAGATGCT GGACGCGGTC
ATGCTGCCGA ATGTTGTGTT GGCGCCCGAG GCAAGGACCC AGCATCCTCC CAGTCTGGAC
CAGCTGCTTG CCATTCAGGC GCCTGAGCGC TATGTCAACG TCGTTGCCGG GCCTGGTTCC
GGCAAGACGT CGACGCTGGT TCACCGGATT CGCTACCTGA TTGATGAAAA AGCTGTCGAC
CCGAGCCACA TCCTCGTTCT AACGTTCACC AACAAGGCGG CGTTCGAGCT CGTCGACAGG
TTGCGCGACG CGAATATCCA TCGCGCATCG GACGTGTGGG CCGGCACTTT CCATGCGTTC
GGACTGGATT TCCTGCGTAA GTACCACCAG TGCTTCGGCT TGGAGTCCGA CCTCAAGGTG
GCGGACAGGC TCAATGCAAT CACGATACTC AACCAGGAGC TGCCCAAGGT TGAGCTCACC
CACTACCGGC GCGTCCAGGA CCCCTATGAC TGGCTGCCAG ATGTCGTCAA TAGCATCAAG
CGGTTGAAGG AAGAGATGGT CTCGCCGGAG GCGTATCGAC TAGCCATTCA AGGTCTACCG
ACTGCCGAGC CGGGTCGAAG AGAATGCCGC GAAGATGTCG CGAGTCTCTA CGAATGCTAC
GAGCGAGCGC TACGCGAACG GAAAATGGTG GATTTCGTCG ACTTGGTCGC AAAGCCTGCC
AAGGCCATTG AGCAAGACCG TCCGCAGTAC AGCGAGCTTG CAGACAAGTT CCAACACGTA
CTGGTCGACG AGTATCAGGA TGTCACGCAT GCGATGGTCG AGCTCATCTC GCAGTTGGCG
AAAAACGCCA AGTCGCTCTG GGTCGTCGGC GATGTGCGTC AGGCGATTCA TCATTGGCGC
GGCGCTTCCG TGCACAGTTT GACGAAGTTC AACGAACGCT TCGAAGCGCA GGCTGGTAGC
GGTAAGATTA AAACGTATCC GCTGGCCTTC AATCGGCGTA GCTCCAGTGA AATCCTGGAG
CTCGTGAAGC AGGCCGGGAA GCGGCATATC CTCGAAACCA CGTCGCTCAA GCTGGAGAAT
ACGACGGCCA CTTCAGGACC GAATGGACAT CCCCCCACCC TGGTGTCATG CTTTCCGTTC
GTCTCCATGC CAGATGCAAT CGCGGCGGGG ATACATGAGC TTCATTCTGA AGGAGTGCCT
TTCGGCAAGC AGGCTGTACT CAACCGCTGG AACTACGAGC TCGGCATGGT GGCAGCCGGA
CTCCGCAGGG TCGGCATCCC GGTCCTGCAC ATTGGCGAAC TGGCTCAGCG CCCCGAGGTG
AAGACGCTAC TGTGCTTGAT GCAGCTTATG GTGGAGCGAT TGCCGCGGGC GCTTGTGGGG
CTGATGGGGG ACGCGCGCCT CGCCGTCGAT TTCGAAGACT TCCAGAAGCT GATGGAGCTG
TGCGAGGAAG ACCCCTTGCT GCAACGTGGG GCATGGCTCG ACGATTTGCC GGAGGACCTC
TCACCACAAT CACGGTCGGT GCTTGTGACG ATTGCCAGGC TATTGAATGG TCAATGGCGA
CGGTCCAACC CATGGGGCTT CGTTTGCGAC TTGCTGCTGG AGCATCGCTT CGGTTATCCA
CCCCGCGCGG ATGTATCCAT CGAGGCGCAC TCCTTGCGAA TCGCTCTCTG GCAATTCGCG
TATGCCACGC GGACAGGCGA CGGTGAGCGT AAATTCCCGA CCCTGCCTAG GTTCCTGTTA
CGTCAGCAAC TGCGGCAGCG CATCGGTGAA ACCTATTCCG AGCGCGAGCT GCCTGCAGAG
GTCGCTGCAA TTGATGCCGT GCGACTACTC TCGATTCACG GCAGCAAGGG CCTCGAATTT
GATTCCGTCC ACGTGAACAA CGTGAATACG GACGACTATG GCCCAAAGGG TCGCTACTGG
GAATCACCGT CCGAGGCCTC ACGGCTCGTT CCTCCCGAGG TCTTGCGCAG CTCCCAGGAG
ACCTGGAACT TCGAGGCAAC GGTCGAGCGG AATAACTTGC TCTACGTCGC GCTGTCGCGA
GCTCGCAAAC GTCTGTTTAT GTACCAGAAC GGCGAGGACA CTCGCAAGGG GGCACCACAG
CTGAGCCCTC CATCAGCTCC GGTCAGGGCA CTTTCGTTTA ATGGGACAGT GACAGCCCCA
GCTGGACAGG CACCCATTCC GCGGCCCCCA CTAACGGAGC CGTTGCCATT TGACGAATTC
GAGACGTTCG TGCGATGTCC CCTGCAGCAC TGGTATCGCT TTGAGCTGCG GCTCGCCGGC
GAGCAAGGGG TAGACATTGC AATAAAGGCG CGATGGGCTG TCATGGCTGC CCTTAAGGCG
CTTGCGCAGA AGCCAGGCTC TTCACCCAAA GAGGCATTCA TGGCGGAATG GGAGAGTCGC
AAGCTTCCTT CTCATACAGA AGACTTGCAG CTATGGACGC ATGCCACCGC GGTGTTCTGG
GATGGATTGG CCATCATCAA GGCCTCCGCG GGTGCATTCG TAGAGCCGGT TACATCGATT
AACGGTTTGA CGATTCGCCT GAACTGGATG CTGCTCAATG CATCAGCGGG GCGGCCCGCC
CTGGAACTAA TTAGATTCTC TGGCAGTGAC CTGACAAAGG CAGCCCAGTT GCTCCGCCCC
ATGCTCAACG ACCTTCAGCC CGTCAGGGCC CGCGGCGTGA CTATTCACAG CCTGTTGGGT
GCCAAGAAGG AATCGTTCGA GCCGAGCGGT GCAATCGAAA AAACTGCGGC ATTCGCCGCG
GTACAGCGGT TCTTCGCGGG CAATCGGGAG CCAAAGGTCG GCAGACACTG TAAGCGTTGC
GCCTATATGA CGTTCTGCCC GACTCGGCCG TCGATGTAG
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| Protein sequence | MNPFQRAREQ AVALRRKLLD DRAGEAVHVS EFLTPDPIAA KLSLGVEYVP KGAAELSNGD
AILRRKEDYI YVRKDIGVAE QAYLVAHELG HFILDESQEE VAIASLSSLT DAEGTPAVIS
VEAYGARERL ELRANVFARE LMLPREVARV LHDAGVGPRK AARDLGIHLE IVRQQMLDAV
MLPNVVLAPE ARTQHPPSLD QLLAIQAPER YVNVVAGPGS GKTSTLVHRI RYLIDEKAVD
PSHILVLTFT NKAAFELVDR LRDANIHRAS DVWAGTFHAF GLDFLRKYHQ CFGLESDLKV
ADRLNAITIL NQELPKVELT HYRRVQDPYD WLPDVVNSIK RLKEEMVSPE AYRLAIQGLP
TAEPGRRECR EDVASLYECY ERALRERKMV DFVDLVAKPA KAIEQDRPQY SELADKFQHV
LVDEYQDVTH AMVELISQLA KNAKSLWVVG DVRQAIHHWR GASVHSLTKF NERFEAQAGS
GKIKTYPLAF NRRSSSEILE LVKQAGKRHI LETTSLKLEN TTATSGPNGH PPTLVSCFPF
VSMPDAIAAG IHELHSEGVP FGKQAVLNRW NYELGMVAAG LRRVGIPVLH IGELAQRPEV
KTLLCLMQLM VERLPRALVG LMGDARLAVD FEDFQKLMEL CEEDPLLQRG AWLDDLPEDL
SPQSRSVLVT IARLLNGQWR RSNPWGFVCD LLLEHRFGYP PRADVSIEAH SLRIALWQFA
YATRTGDGER KFPTLPRFLL RQQLRQRIGE TYSERELPAE VAAIDAVRLL SIHGSKGLEF
DSVHVNNVNT DDYGPKGRYW ESPSEASRLV PPEVLRSSQE TWNFEATVER NNLLYVALSR
ARKRLFMYQN GEDTRKGAPQ LSPPSAPVRA LSFNGTVTAP AGQAPIPRPP LTEPLPFDEF
ETFVRCPLQH WYRFELRLAG EQGVDIAIKA RWAVMAALKA LAQKPGSSPK EAFMAEWESR
KLPSHTEDLQ LWTHATAVFW DGLAIIKASA GAFVEPVTSI NGLTIRLNWM LLNASAGRPA
LELIRFSGSD LTKAAQLLRP MLNDLQPVRA RGVTIHSLLG AKKESFEPSG AIEKTAAFAA
VQRFFAGNRE PKVGRHCKRC AYMTFCPTRP SM
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