| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1195 |
|---|
| Symbol | |
|---|
| ID | 3963520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1280530 |
|---|
| End bp | 1281726 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637916010 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_522461 |
|---|
| Protein GI | 89899990 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGCGCC TCGCCCTGGA GGTCGCCGAC ATCTTTCGTA CCCACGGCCC GGCTTGGCGT
AATGGCCAGC AGGGGCACCT GAGCCTGGGT CAACTCAAGG TCATGTCGGC CATCGAACAG
TGCCGCAGCG CGGCGCTGGG GGGACACCTG TTGCACTGCC AGGCGTGCGA GCACGGCGAG
ATTGCGTACA ATTCGTGCCG CAACCGGCAC TGCCCCAAGT GCCAGGCCAG TGCGGCCAAG
CGTTGGCTGG AAGAACGCCA GGCCGAACTG CTGCCAGTGG ACTACTACCA TGTGGTCTTC
ACCTTGCCCG CACCCCTCAG CGCCATTGCG TACTACAACA AGGCCGTGAT CTACCGGCTG
TTGTTTGAGG TGGCAGCAGA AACCCTGATC ACCATCGCAG CCGACCCCAA GCATCTGGGC
GCGCAGATCG CAGCAACGCT GGTGCTGCAC ACCTGGGGAT CGGCACTGAC GCACCACCCG
CATGTGCACG GCATCGTGCC CGGCGGCGGT CTGACCAAGG ACAGCCAGAG TTGGGTCGCG
TGCAAACCGG GCTTCTTCCT GTCAGTGCGC GTGCTCTCTC GGCTGTTTCG CCGGCGCTTC
CTCGAAGAAC TCGACCAGGC GCATCAAGCC GGCCAGTTGC AGTTCTTCGG CGAGTACGCC
GCGCTAAGCG ACGCGAGCGC ATTTGCCAAA TGGCTGGCAC CGATGCGACG CTGCGAATGG
GTGGTCTATG CCAAACGCCC GTTTGCTGGT CCACAGGCTG TGCTGGCCTA TTTGTCGCGC
TACACCCACC GGGTCGCCAT CGCCAACTCT CGACTGGTAT CGATGGACGA GCGCGGTGTC
ACGTTTCGCT GGAAGGATTA CCGGGACAAG GGCAAGACGC GGCACAAGAC CATGACCCTT
GAGCCAGACG AGTTCATGCG CCGCTTCCTG CTGCATGTTC TACCCACCGG CTTTCACCGC
ATTCGCCACT ATGGATTTAT TGCCAACAAC GCTCGCAAAG AGAACCTGGC ACGCGCCCGT
GAGTTGCTCG ATGTCGCACC TGTTGCAGTT GCCGACGCGA AGAACACCGA CGAGCCAGTT
GAACTTGTGC GACCGACCTT CGTCTGCGCG CGCTGCGGCG CGCCAATGAT CATCGTTCAA
ACGTTTATGC GCGGCCAGGC CATTCGGGCA CCGCCTTATG AACAGGCTGC ACCATGA
|
|---|
| Protein sequence | MGRLALEVAD IFRTHGPAWR NGQQGHLSLG QLKVMSAIEQ CRSAALGGHL LHCQACEHGE
IAYNSCRNRH CPKCQASAAK RWLEERQAEL LPVDYYHVVF TLPAPLSAIA YYNKAVIYRL
LFEVAAETLI TIAADPKHLG AQIAATLVLH TWGSALTHHP HVHGIVPGGG LTKDSQSWVA
CKPGFFLSVR VLSRLFRRRF LEELDQAHQA GQLQFFGEYA ALSDASAFAK WLAPMRRCEW
VVYAKRPFAG PQAVLAYLSR YTHRVAIANS RLVSMDERGV TFRWKDYRDK GKTRHKTMTL
EPDEFMRRFL LHVLPTGFHR IRHYGFIANN ARKENLARAR ELLDVAPVAV ADAKNTDEPV
ELVRPTFVCA RCGAPMIIVQ TFMRGQAIRA PPYEQAAP
|
|---|
| |