| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1184 |
|---|
| Symbol | |
|---|
| ID | 3963568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1269396 |
|---|
| End bp | 1270343 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637916000 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_522451 |
|---|
| Protein GI | 89899980 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCTACT CCGCTCAAAT CTGGGCTGAA CACAGAAAGT ACGTCAGGGC GTTCGGCGTC
GAGATCGACA TCAAGGAATA TGTCAAACTT TTCTGGCAGC GAAATGAAAA CGACCGCATC
AAGGTTCCCA AAGCGATGGA GGAGTCGTTT ACCGCCCCGC AAGGTGAAGA CGAAGCGGCC
ATCAAGAGCT TGACTGACGC GTACAAGGTT CAGCAAGCCG ACAAACTGGC GCAGGAGTTG
TTCAAGCAAC GCAAGCGACT GGCTGATGCT CAGCGCAGCC TGACGGCCAA GACCACAAAG
GCGGCGACCG AGGCCACGCG AATCGCCAGC ACCAAAATTG AATGGCTCTT GGCAAAATTG
GCAGACTCCA GGCGCACCGA GCTGAAGGAC AGCGATTCAA GAATTTATCC TGGCTACTTC
GCGCCGGTGC TGATTGTGGA AAACGGCAAA CGCCTTGTCC GCCCCATGCG CTACCAGTGC
CGCCCGGCTG GAAAGCCAGC GGCCTACGAC ACCAGGTATC CGGGCACCTA TAACGCAAGA
AGGGACAGCC TGGAGGGCTT CTGGAAGAAC CAGTTCGGCT ACACACACGG GCTCATGGTC
GTCAATGCGT TCTTTGAGCA TGTTTCCAAG CCATTGAAGA ACGCAAGTGG CGCGCAAACA
GAGAGCGTGA TCCTGGAGTT CAAGCCACGA CCAGTACAGG ACATGTTGGT CGCCTGCCTG
TGGTCGCACT GGACAGGAGA CGCAGGGGAT GACCTTTACT CCTTCGCTGC CATCACGGAT
GAGCCACCAG AAGAGGTTGC AGCCGCTGGT CACGACCGCT GCATCATTCC GATCAAGCCT
GAAAACATCG ACGCCTGGTT GAATCCAGAC CCCACCAATC TCGCGGCACT CTACGCCATC
CTGGATGACA GGGAGCGTCC TTACTATGAG CACCGGCTGG CCGCATAG
|
|---|
| Protein sequence | MCYSAQIWAE HRKYVRAFGV EIDIKEYVKL FWQRNENDRI KVPKAMEESF TAPQGEDEAA
IKSLTDAYKV QQADKLAQEL FKQRKRLADA QRSLTAKTTK AATEATRIAS TKIEWLLAKL
ADSRRTELKD SDSRIYPGYF APVLIVENGK RLVRPMRYQC RPAGKPAAYD TRYPGTYNAR
RDSLEGFWKN QFGYTHGLMV VNAFFEHVSK PLKNASGAQT ESVILEFKPR PVQDMLVACL
WSHWTGDAGD DLYSFAAITD EPPEEVAAAG HDRCIIPIKP ENIDAWLNPD PTNLAALYAI
LDDRERPYYE HRLAA
|
|---|
| |