Gene Rfer_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1177 
Symbol 
ID3963561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1264087 
End bp1265172 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content52% 
IMG OID637915993 
Producthypothetical protein 
Protein accessionYP_522444 
Protein GI89899973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTT CCGCCTCTTT TCCTGCAGGG GTGCCTCTTC CATTTCTTCC GATGTGGATT 
GAAGGCGAGA CCCTATATTC TTGGGCTGCC CGCTTTCACG AACTCCAGGG AAGAACCTCA
AGTAGGCAGA CTGGAATTAC CCTATTTGGA CGAAGCCACG CTGCGGCGGA CTATGCGATT
CCATTAGGTG TCGCGCATTT CGCGGCGTTG ACGCGTGGGC AACTCGGGTC TCCTTCCGAA
ATCCTTATGA AGCGGACGGC GTTGTGTGAG TTGCGACCGT TTCTTTCCAT CTCATGCTGG
GATTCAATGC TTAAACGATT TGTCGATACT CTGAGAAGTG AGAATACTCG ACCGACTGTG
GGAATTCGAG CGGGAGGCAT TGGGGAACGA TGCCCGCTTC GCTATTGCGG TGACTGCATC
AAGGATGAAC TCGCAGAGTT GGGAACGTCG TATTGGCACC TACAGCATCA ATTGCAGTGC
AGTGTTACAT GCCTCAAACA CCAAAAGCCA CTTGAGTTCC CCGAGCGTCG ACGAACCACT
TGGTCTCTTC CTCATCACGC TAATTCATTC GCCAAATCTG CATCAGTCTC GGACAGATTT
CTTGCGTCGG CATTGCTGCT CAGTCGCATT TCGGAGGTTT GTACGCAGTT GAATCCAATA
CACATACCGA CTTTTGCGGA CGCTGCGACT CGGTCCCTTC TGAATCAGGA TGTCGCGACG
ACCGTGCCCC GACGCTGTGG GGATGCACTG TCGGCTTGGT TTTCTCAAAC GCAATCAAGC
CAAGTTGCCA GGGTCTACTA TCCAGATCAC GCAGATCTGA TTTCTGGAAG GTGGATTGTT
CAGTTGCTTC GGTCCCGGTG CTCAATTAAG CCAATTCACT GGCTGCTGCT GTGGGCCGCC
ATCCTTGAGA ACGTACCGGA GGAGTTGGCC TTAAAGCAAT TTGGGCTGGC CGTGAACTGC
CAAGCCGTCG ACTCCGAGCT GGCAGATCAC TGGTCTGAAT TGTCTAATCA CATGCTCTAT
AGATTCGTGC ACGCCAGGCA CAGGGCATCA AATGCTTCAC AAGAAGAAAG GCATGGAATT
CAATGA
 
Protein sequence
MKASASFPAG VPLPFLPMWI EGETLYSWAA RFHELQGRTS SRQTGITLFG RSHAAADYAI 
PLGVAHFAAL TRGQLGSPSE ILMKRTALCE LRPFLSISCW DSMLKRFVDT LRSENTRPTV
GIRAGGIGER CPLRYCGDCI KDELAELGTS YWHLQHQLQC SVTCLKHQKP LEFPERRRTT
WSLPHHANSF AKSASVSDRF LASALLLSRI SEVCTQLNPI HIPTFADAAT RSLLNQDVAT
TVPRRCGDAL SAWFSQTQSS QVARVYYPDH ADLISGRWIV QLLRSRCSIK PIHWLLLWAA
ILENVPEELA LKQFGLAVNC QAVDSELADH WSELSNHMLY RFVHARHRAS NASQEERHGI
Q