| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1156 |
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| Symbol | |
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| ID | 3963462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1242123 |
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| End bp | 1242971 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637915972 |
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| Product | peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 |
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| Protein accession | YP_522423 |
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| Protein GI | 89899952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.203419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAC ATCTTTTCGT GTGTCTTGCA ATCTGCTCAG CAGCCAGCGC GTCCGCCATG
TCGTTTGGCT CTCAGCATGC CATCGTTGTT AATAACGAAT CCGGCGAAAT TTTGTTCGAA
GAAAATGCGA GTTCTGTTGT TCCAATTGCT TCTTTAACCA AGTTAATGAC GGCAATGGTC
GTGCTGGATA GCAAGCCAGA TATGGAAGAA AAAATTTCTA TCCAATTAGC GGACGTCGAT
ATGTTCAAAC ACAGCGCTTC GCATGTTCCT TTAGGGACAA CGTTACCTCG GAGAGAGGTT
TTGCAACTAG CGCTGATGTC ATCGGACAAT CGCGCTGCCG CATCACTTGC ACGGACCTAT
CCAGGCGGAA ATCCGGCTTT TGTCAAAGCC GTTCATGAAA AGATCAAGTC GCTCGGAATG
ATCAATACGG TCATCAAAGA GCCAACGGGT CTGTCTCCCG AAAACGCCTC GACAGCAGCC
GATCTCGCAA AAATGGCGTT CGCCGCGTCC CGATATCCGG TCATCGTCAA TATCACAACG
GATCGGTCCG ACCTGATCAA CATGCAGGGC CGAAGCGTGG AATTTCACAA CACCAACCGA
CTCGTTGGCA AACGCGGGTG GGACATCCTG TTGTCCAAAA CTGGGTTTAC CAATGAAGCG
GGACACTGCC TGATCATGCG AATCAAGCTG GCGGGAAAAA ATACCACCTT GGTTTTACTG
AATGCGAAGG CCAGTTCTTC AACTTTCTTT GATGCTTTGA ACATACGTCG TTTTTTGGCA
AAACAAACGA TTCTTCAGCC CTCAATAACA TCAACGCTTC ATAAGCGTCA TCACTTCAAG
CTGTCGTAG
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| Protein sequence | MLKHLFVCLA ICSAASASAM SFGSQHAIVV NNESGEILFE ENASSVVPIA SLTKLMTAMV
VLDSKPDMEE KISIQLADVD MFKHSASHVP LGTTLPRREV LQLALMSSDN RAAASLARTY
PGGNPAFVKA VHEKIKSLGM INTVIKEPTG LSPENASTAA DLAKMAFAAS RYPVIVNITT
DRSDLINMQG RSVEFHNTNR LVGKRGWDIL LSKTGFTNEA GHCLIMRIKL AGKNTTLVLL
NAKASSSTFF DALNIRRFLA KQTILQPSIT STLHKRHHFK LS
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