Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1144 |
Symbol | |
ID | 3963450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1227119 |
End bp | 1229674 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915962 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_522413 |
Protein GI | 89899942 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0307276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGA GCGTTATTGC GGTGCGCGAC ATGTTGTCGG TATTGAGCGT GCTGGAAGTC GAAAAACGCA TTGGCGAGGT GCGCGGTGTC AAAAGCGTTA CCGTGAATTA CGCGGCGGGC AACGCCACCG TTCGTTATGA CGAAACCCAG CTGGAAGTCG GCGATATCAA GTCGGCCGTG CGCCAGCACA GTTACGAATC CGTCGCACCA GCCGCTGCTG CCGGTGAAGG CCATACAACA CAGGGCGTCC CGCCGTCTAC ATCTAACGCC CCTGTGACGG AAACTGCCCC GGACGCGCCT GCCGCCCCAG CAGTAGAACC GACCGCCGCC GGCACAATCT ACACCTGCCC GATGCACCCC GAGATTCGCC AGGACCATCC CGGCAACTGC CCCAAGTGCG GCATGACGCT GGAGCCCGAA CTGCCCAAGC TCGATGACGA TGAAAATCCG GAGTTACGCG ACTTCTCACG TCGCTTCTGG TGGACCCTGC CGTTGACAGT CATCGTCTTC GTCCTGGCCA TGTTTGGCCA TTTTCAGCAT TGGATGGATG GGGGGGTGCA GAGCTGGGTT GAACTGGTTC TTGCAACACC GATTGTGTTG TGGGCTGGTT GGCCCTTCTT TGTGCGTGGC TGGCAGTCGG TGGTGAAACG CAGCCTGAAC ATGTGGACGC TGATCGGTCT GGGCACCGGT GCTGCTTACA TCTATAGCGT TGCGGCCACC GTGGCACCCC AGATTTTCCC GGCCTCGTTC GTGTCCATGG GACGGGTTGC GGTGTATTTT GAAGCGGCGG CGGTGATCAT TTCGCTCACC CTGATGGGCC AACTGCTGGA ACTCAAGGCC AGGTCCCAGA CCTCGGCGGC GATCAAGTCG CTGCTCGGAC TGGCCCCCAA GACGGCGCGT CGCATTCTTC CCGATGGCAC TGAGGAAGAC GTGCCCCTGA GCAACGTCCA CGTCGGAGAT GCCCTGCGCG TGCGTCCGGG CGAAAAAGTG CCCGTGGACG GTACCGTGAC CGAGGGCAGC AGCGCGGTCG ATGAATCCAT GCTGACTGGG GAACCCGTGC CGGTGAGCAA GCGACTGGGC GACAAGGTGA TCGGTGCGAC GCTCAATACC AGTGGCGCCC TGGTCATACG GGCCGAAAAA GTGGGGTCCG CCACCATGCT GGCGCAGATC GTGCAAATGG TGGCCCAGGC GCAACGCTCC AGGGCGCCGA TGCAACGCAT GGCTGATGTG GTGGCTGGTT ACTTTGTCGC CGCCGTCATG GTCATTGCCG TATTGACTTT CTCTGTTTGG GGGCTGTTCG GGCCGGAGCC GAGTTGGGTT TTCGGCCTCG TCAACGCGGT GGCGGTGCTG ATTATCGCCT GCCCTTGCGC CTTGGGACTG GCGACGCCGA TGTCCATCAT GGTGGCCACC GGGCTGGGGG CCACGCGCGG TGTGCTGTTC CGCGACGCGG CGGCGATCGA GAACCTGCGC AAGATTGACA CCCTCATCAT CGACAAGACC GGCACCCTGA CCGAGGGGCA CCCGGCGTTC GATCGGGCGG TCCCTGCGGC AGGGTTTGAG GCCGACGAGG TACTGCGCCT GGCCGCGAGC CTGGACCAGG GCAGCGAGCA CCCATTGGCC GAGACGATCG TTCGCGCAGC GCGCGAGCGT GGAATGACGC TGGACAAGCC GGAAAACTTT GAATCCGCTT CGGGCATCGG CGTGCGCGCT CAGGTCGCGG GGCAGCAGCT TGCCCTTGGC AATAGCACCA TGATGCAGCA GATCAATGTC TCGGTTGCGC CTCTCATGTC GCAGGCTGAA GGCTTGCGTG CTGAAGGTGC CAGCGTCATG CATCTGGCGG TCGATGGCAA GCTGGCCGGC CTGCTGGCGG TGTCCGATCC GATCAAGCAG AGTACACCCG AAGCCTTGGC GACTTTAAAA GCGGCCGGCC TGCGCATCGT GATGGCCACT GGCGACGGCC TAACCACCGC CAAGGCCGTG GGGGCGCGAC TGGGCATCGC AGAGGTGCAT GGCGAAGTGA AGCCCGCTGA CAAACTTCTG CTGGTGGAAA AGCTGCAAAA AGAAGGACGC ATCGTGGCGA TGGCCGGAGA CGGCATCAAC GATGCACCAG CGTTGGCCAA AGCGGATGTC GGCGTGGCCA TGGGCACCGG CACCGATGTG GCCATGAACA GTGCACAACT TACGTTGATC AAGGGTGATT TGCGCGCGCT CGCCACCGCG CGCTTGCTCT CCGAAGCGAC GGTGGCCAAT ATGAAGCAAA ACCTGCTGTT CGCCCTGCTC TATAACGGGT TGGCGATTCC GATTGCGGCC GGCGTGCTGT ATCCGCTGAC CGGCTGGCTG CTCTCGCCCA TGATCGCGGC CCTGACCATG AGCCTGAGTT CGGTTTCGGT GATTGGCAAT GCGCTGCGCT TGAAGCGGAC CAAACTGGCT GGCAACACTC AGCCTGGCAA GACTGCGGAA ACTGCGGTGG TGCCTGACAA ACCCGCACCC GAAGAAACAG TCAAGGCTTC GGGTGCACCC AAAAACCAGG AGCCCGACAA GAGACCATCC GAGTGA
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Protein sequence | MKTSVIAVRD MLSVLSVLEV EKRIGEVRGV KSVTVNYAAG NATVRYDETQ LEVGDIKSAV RQHSYESVAP AAAAGEGHTT QGVPPSTSNA PVTETAPDAP AAPAVEPTAA GTIYTCPMHP EIRQDHPGNC PKCGMTLEPE LPKLDDDENP ELRDFSRRFW WTLPLTVIVF VLAMFGHFQH WMDGGVQSWV ELVLATPIVL WAGWPFFVRG WQSVVKRSLN MWTLIGLGTG AAYIYSVAAT VAPQIFPASF VSMGRVAVYF EAAAVIISLT LMGQLLELKA RSQTSAAIKS LLGLAPKTAR RILPDGTEED VPLSNVHVGD ALRVRPGEKV PVDGTVTEGS SAVDESMLTG EPVPVSKRLG DKVIGATLNT SGALVIRAEK VGSATMLAQI VQMVAQAQRS RAPMQRMADV VAGYFVAAVM VIAVLTFSVW GLFGPEPSWV FGLVNAVAVL IIACPCALGL ATPMSIMVAT GLGATRGVLF RDAAAIENLR KIDTLIIDKT GTLTEGHPAF DRAVPAAGFE ADEVLRLAAS LDQGSEHPLA ETIVRAARER GMTLDKPENF ESASGIGVRA QVAGQQLALG NSTMMQQINV SVAPLMSQAE GLRAEGASVM HLAVDGKLAG LLAVSDPIKQ STPEALATLK AAGLRIVMAT GDGLTTAKAV GARLGIAEVH GEVKPADKLL LVEKLQKEGR IVAMAGDGIN DAPALAKADV GVAMGTGTDV AMNSAQLTLI KGDLRALATA RLLSEATVAN MKQNLLFALL YNGLAIPIAA GVLYPLTGWL LSPMIAALTM SLSSVSVIGN ALRLKRTKLA GNTQPGKTAE TAVVPDKPAP EETVKASGAP KNQEPDKRPS E
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