| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1138 |
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| Symbol | |
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| ID | 3963444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1223382 |
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| End bp | 1224551 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637915958 |
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| Product | transposase, IS4 |
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| Protein accession | YP_522409 |
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| Protein GI | 89899938 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.16162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAG GCAAGCTCGT ATTTGCGCAA CTCATGCTCT ATGTGCCGCT GAGCACGTTT
CGTCGCTGTG TGGCCGACCA CCGTGGCGAA CACAAGGTCA AAGACTTCTC GTGTCTGGAT
CAGTTCTTCG CCATGGCATT CGCGCAGTTG ACCTACCGCG AATCTCTGCG CGACATCGAA
GTCAACCTTC GCGCTCAGGT GCGTCGGCTG TACCACATGG GGTTTCGCTG CCAGACGATT
TCGCGCAATA CGTTGGCCAA CGCGAACGCC ACACGGCGAT GGCAGATCTA TGCCGACTTC
GCCCAGCATC TGATTGGCTT GGCGCGTCCC CTGTATGCCA CGGAGCCGTT TGGGCTGGAA
CTCGACGCTG CGGTTTACGC GTTCGACGCC AGCACCATCG ACCTGTGTCA GTCTGTTTTT
GCCTGGGCAC CGTTTCGCTC GACCAAGGCG GCCATCAAGT TGCACACACT TCTGGACCTG
CGCGGCAATA TTCCCAGTTT CATTCACATC ACCGACGGCA AGACGCACGA GGTCAACGTA
ATGGACGATC TGGTGCTGGA GCCGGGGGCG TTTTGCCTGA TGGACCGGGG CTATCTCGAT
TTCGCACGAC TGTTTGTGAT TCACGAGGCA CAAGCCTTCT TTGTGACGCG CGCCAAAAGC
AACACCAAAT TCAAACGGCG CTACTCGCAT CCGGTCGATC GGATCAATAC CACTGTGCTG
TGCGACCAAA CGGGCGTGCT CACGACCTAC TATGCAGGCA AGGATTACCC CACGACGCTG
CGCCGGGTGG TGGTCAAGGA CGACACCGGA AAACGGCTGG TGTTTTTGAC CAACAACTTT
GCCTTGAAGC CCGAGCTGAT CGCCGATCTT TACCGCCAGC GCTGGCAGGT CGAATTGTTC
TTCAAGTGGA TCAAGCAGCA CCTGCGCATC AAGGTGTTCT TTGGCACCAG CGAGAACGCG
GTCAAGACGC AGATATGGAT TGCCATATCG ACTTACCTGT TGATCGCCAT CACGAAGAAA
CGTCTGCGTC TTGATCATCA CAGCCTGTAT GAAATATTAC AAATCTTGAG CCTGTCCATG
TTTGAAACTA TCCCGATTAA TCAACTACTT ATGCCACCCT CAACGAATTC AGAGCCGGAT
TTCGAGCCCA ATCAGCTCGC TCTCCTCTGA
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| Protein sequence | MHQGKLVFAQ LMLYVPLSTF RRCVADHRGE HKVKDFSCLD QFFAMAFAQL TYRESLRDIE
VNLRAQVRRL YHMGFRCQTI SRNTLANANA TRRWQIYADF AQHLIGLARP LYATEPFGLE
LDAAVYAFDA STIDLCQSVF AWAPFRSTKA AIKLHTLLDL RGNIPSFIHI TDGKTHEVNV
MDDLVLEPGA FCLMDRGYLD FARLFVIHEA QAFFVTRAKS NTKFKRRYSH PVDRINTTVL
CDQTGVLTTY YAGKDYPTTL RRVVVKDDTG KRLVFLTNNF ALKPELIADL YRQRWQVELF
FKWIKQHLRI KVFFGTSENA VKTQIWIAIS TYLLIAITKK RLRLDHHSLY EILQILSLSM
FETIPINQLL MPPSTNSEPD FEPNQLALL
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