| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1136 |
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| Symbol | |
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| ID | 3963442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1221058 |
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| End bp | 1222683 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915957 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_522408 |
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| Protein GI | 89899937 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACA TTGGTCTGAC CCAGCCAAAC CGAACTTCAC ATCGAATTCC ATGGCTTATG
GGTCTGGGCT ACATATTGGT TTTTTTGCTG CTCGACTGGG CGAGCTACAT ACGGCCTTTT
CAAGGTCTCA ATATCACGCC TTGGAATCCG CAGCCGGCGC TTGCCGTCGC ATTGCTGCTG
TTGAACAGGC GCTGGCTGTG GATTGTCTGG GTAAGCCTGA TAACGGCTGA GCTGGTCGTG
CGCGGAAATC CAGCCGACTG GCTCGTGGTA TTGACATCAA CGGCCGCGCT CAGTCTGGTT
TACGCTGCCA TTGCCCATAG CTTGACAACC CGAATGGATC GCGCGCTGGC CTTGGCCACA
CAAAGAGATC TTTTGTGGTT CACTGGCATC GTCGTGACTG GAGCACTGCT GAGCGGTGTG
GTCTACATCA CAGCATTCTC AGTGGCAGGT CTAGGGCCGA GTGGTCCAAC CTACGAGCCG
ATCGTGCGGT ATTGGATTGG CGACGCCGTG GGTCTAATCG TGCTGCTGCC AATGCTTCTC
GTTGTAATGG ATCCCCTACG TCGGGCCACA CTGGTCGAAA CGCTTAAAAG CCGTCAGTGG
TGGGCCGTCG CTGTTCTAAC GTGCTTGCTC CTTTGGGTCG TGTTTGGTCC AGGTGGGCAA
GACCATTTCA AATACTTCTA CTTACTGTTT GTGCCTGTTG TCTGGGCATC AGCCAAGCTG
GGGGTACCTG GGGCTGTGCT TGCCTCGGGC CTGACCCAGT TGGGACTGAT CTTCGCCGTG
CAATCGGTAC CCAACGAGGA CCTGACGGTG TTCGAGCTTC AGGTGCTGAT GGCCGCAGTT
ACCATGACAG GTTTACTTCT TGGCGTTGCC GTTGATGAAA GAACTCGCGC AGCCGCTGAA
CTTCGAGGCA GCTTGCGCAT GGCTGCGGCC GGCCAGATGG CGGCGGCGCT GGCCCATGAA
TTAAGTCAAC CCCTTACAGC ACTGAGCAAC TACGCCCAAG CCTGCCAAAT GCTCGTAACC
GACGCACCCG GCCTACAACC GGATCATCGT GACCAATTGG TCGAAGTTAT GCAGCGGATG
GTTGACGATG CCAACCGTGC TGGTAATGTA ATCAAGCGTT TGCGCGACTT TTTCAGGACC
GGATCCACAC ATCTGCACTT GGCCTCACCA ACGGCAATCG TCGAAGAAGC AGTGCAAGTT
CACCTTCGCC GGGCCGACGC CCTGAAACTG CGTATGGAAA GCCAAATTCA GGACAACTTG
CCGATGGTAT GGATGGATCC TATCCAGATC GCTGTGGTAC TGCGCAATTT AGTCACGAAT
GCCATAGACT CTGCCGCGGC GACAAGAAAC GGCGACCTCG TGGTGATTCG GGCGTGCGTC
ACCGATGGCG AGTTGCTGAT CGAAGTTCGA GACAATGGCC CCGGCGTCGG CACGGCTCGC
CTGCAAACCC TGTTTGAGGC CGGACCTTCA GACAAGCCGG GCGGCATGGG AGTTGGTTTG
AGCATCTGCC GCGCGATTGT TGAAGCCCAT GGGGGCAGAC TCTGGGCGGA ACCGGGCTCA
GAAGGCTGCT TCCGCTTTAC GCTGCCAGTG GAGAGCGAAA ACCATAGCGA AGTTAAAAAT
GCATAA
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| Protein sequence | MTNIGLTQPN RTSHRIPWLM GLGYILVFLL LDWASYIRPF QGLNITPWNP QPALAVALLL
LNRRWLWIVW VSLITAELVV RGNPADWLVV LTSTAALSLV YAAIAHSLTT RMDRALALAT
QRDLLWFTGI VVTGALLSGV VYITAFSVAG LGPSGPTYEP IVRYWIGDAV GLIVLLPMLL
VVMDPLRRAT LVETLKSRQW WAVAVLTCLL LWVVFGPGGQ DHFKYFYLLF VPVVWASAKL
GVPGAVLASG LTQLGLIFAV QSVPNEDLTV FELQVLMAAV TMTGLLLGVA VDERTRAAAE
LRGSLRMAAA GQMAAALAHE LSQPLTALSN YAQACQMLVT DAPGLQPDHR DQLVEVMQRM
VDDANRAGNV IKRLRDFFRT GSTHLHLASP TAIVEEAVQV HLRRADALKL RMESQIQDNL
PMVWMDPIQI AVVLRNLVTN AIDSAAATRN GDLVVIRACV TDGELLIEVR DNGPGVGTAR
LQTLFEAGPS DKPGGMGVGL SICRAIVEAH GGRLWAEPGS EGCFRFTLPV ESENHSEVKN
A
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