Gene Rfer_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1125 
Symbol 
ID3964363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1207781 
End bp1209235 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content61% 
IMG OID637915946 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_522397 
Protein GI89899926 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG ACCTTGTTTT GTTTGGTGGC ACCGGCGACC TGGCCTGGCG CAAGCTGATG 
CCCGCACTGT TTCAGGCCTT TCGCCATGGC ACGCTTCCCC TGGATGGCCG CATCATTGGT
GTTGGCCGCG ACGACCTCAG CAATGCGCAG TACCAGGCCC AGATTTGCGC CCGCTTTGAC
CAGGTCGAGT TGGCCAAACG TCCCAGCGAA GAAGAGTTCT GCCGCTTTGC CGCCTTGCTT
GAATTCGTGC AGATGGATTT ATCCCACCCC GATGACTACG CCCGTCTTGT CGCCAAGCTG
GCCGAGCGCC AGGCCGACGT TGTGGTGATG TATGTGGCGA CTGCACCCAG CCTGTTCACG
ACGGTCTGTC AACAGTTGGC CATTGCCGGG CTGAACACGC CGCAAACGCG CGTGGTGCTG
GAGAAGCCGC TCGGTCACGA CCTGGCCAGC AACCGCGCCA TCAACCGAAC GGTCAGCGAG
GTGTTTGGTG AGAAGCATAT CTTTCGCATC GACCATTACC TGGGCAAGCC CTCGGTCCAA
AACCTGTTTG CGCTGCGCTT TGGCAACGCC TTGTTTGAGC CCTTGTGGCG GCGCGAGCAC
ATTGCCAACA TCCAGATCAC CATCGCCGAA GAACTGGGCG TGGAACAGCG TGGAGCGTTT
TACGAGACCA CCGGCGCCTT GCGCGACATG GTGCAAAACC ATGCCCTGCA ACTGCTGTGC
GCCATCGGCA TGGAGCCGCC CATCAACTCG CATGCCGATG CCATTCGCGA CGAAAAGCTC
AAGGTGTTGC GCTCGCTCAA GCCCTGGACG GCCGAGTCAC TGACGCAGGA CGTCATCCGC
GGCCAATACG CAGCGGGTTC CATTGGCGGT GCGCCGGTAG CGGCCTACCG GGAAGAAACC
GGCGTTGACC CGCACAGCCA CACCGAAACC TTTGTCGCCC TGCGCACCGA AATTTCGAAC
TGGCGCTGGG CCGGCGTGCC GTTCTACATC CGCACCGGCA AACGCCTGGC CAGCCGCGAT
GCCCGCATTG TGGTCAATTT CCAGCCGACG CCGCATGCCA TCTTCAATTC ACAAATCGGC
GACGCGAATC GGCTGGTCAT CAACCTGCAG CCCAAGGATG GCCTGGAATT GCACCTGCTG
GCGCAGGGCC AAAGCAACCG TCGCAACTCA CAGACCCTGT CACCGGTGCA ACTTGACCTG
GACTTTGACA AGCGCTTCGG TTCTGAGCGC GTCGGCGCCT ATGAACGCCT GCTGCTGGAG
GTCATCGATG GCCGCCTGAA TCTGTTTGTG CGCAGCGACG AGCAGGAAGA AGCCTGGCGT
TGGGTCGAGC CCATCCTGGA ACACTGGAAG AACGACACAC AGGGTCCCCG CTTGTACGCC
GCCGGCACCT GGGGCCCCAG CGCATCAAGC GCCATGATTG CGCGCGACGG CTTCTGCTGG
GCTGAAGAAT CCTGA
 
Protein sequence
MSFDLVLFGG TGDLAWRKLM PALFQAFRHG TLPLDGRIIG VGRDDLSNAQ YQAQICARFD 
QVELAKRPSE EEFCRFAALL EFVQMDLSHP DDYARLVAKL AERQADVVVM YVATAPSLFT
TVCQQLAIAG LNTPQTRVVL EKPLGHDLAS NRAINRTVSE VFGEKHIFRI DHYLGKPSVQ
NLFALRFGNA LFEPLWRREH IANIQITIAE ELGVEQRGAF YETTGALRDM VQNHALQLLC
AIGMEPPINS HADAIRDEKL KVLRSLKPWT AESLTQDVIR GQYAAGSIGG APVAAYREET
GVDPHSHTET FVALRTEISN WRWAGVPFYI RTGKRLASRD ARIVVNFQPT PHAIFNSQIG
DANRLVINLQ PKDGLELHLL AQGQSNRRNS QTLSPVQLDL DFDKRFGSER VGAYERLLLE
VIDGRLNLFV RSDEQEEAWR WVEPILEHWK NDTQGPRLYA AGTWGPSASS AMIARDGFCW
AEES