Gene Rfer_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1120 
Symbol 
ID3964358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1203822 
End bp1204682 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID637915941 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_522392 
Protein GI89899921 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCA ACATCGCTCG AATGTTCAAA TCCTTCGCCT GCACGCTGGG ACTGGTTTTA 
ACGCTGGTGC CGGGCGTGGT GCAGGCCCAA TCGACAGTCG CCACGACGGC TTCCAGCGCC
GCTCCTGCCG CCCTGCCCGT CCTCACCGAC GTGAAAGCGG TCGATCCATC CGCTGCCGCC
ATCAAGAAGA CCCCGGATGC ACTTGACAAC CCTTACGGTC TTGAAGCGCT CTGGAAAACC
TCTGATGCAG TTGCCAAAAC TGTGTTGCTG CTGCTGCTCA TCATGAGCGT TGGCAGCTGG
TACATCATGA TCGTCAAGGT TCTGGAGCAA GCCAAGATGG GGCGCCAGGC CAAGGCGGCG
GTCAAGAACT TCTGGACCGC CGGCACCGTG CAACAGGGCG CTGAGGCGCT GGAGAAGAAC
AGTCCTTTCC GTTTTATGGC CGATGCGGCC ACCAATGCGA TCAAGAAGCA TGAAGGCCTG
ATGGGCCACA TTCCACTCAA CGACTGGATG GCGATGGGCA TCCAGCGCGC GGTCGATCGC
ATTCAAAGCA ATACGCAGGG CGGCCTGGCG TTTCTTGCCA CCGTTGGCTC GATTTCTCCT
TTTGTCGGCC TGTTCGGCAC GGTCTGGGGC ATCTACCATG CACTCACCGC CATCGGCATC
TCCGGCCAGG CTTCCATCGA CAAAGTGGCA GGCCCGGTGG GTGAGGCGCT GCTCATGACC
GCGATTGGGC TGGCGGTGGC GGTGCCTGCA GTGCTGGCCT ACAACTGGCT GGTGCGGCGC
AACAAGGCCG TGATGGACGA GGTGCGCGCC TTCAGCAGCG ACCTGCACGC GGTGGTGCTG
GGTTCGGTGG CGAAGGCCTG A
 
Protein sequence
MQINIARMFK SFACTLGLVL TLVPGVVQAQ STVATTASSA APAALPVLTD VKAVDPSAAA 
IKKTPDALDN PYGLEALWKT SDAVAKTVLL LLLIMSVGSW YIMIVKVLEQ AKMGRQAKAA
VKNFWTAGTV QQGAEALEKN SPFRFMADAA TNAIKKHEGL MGHIPLNDWM AMGIQRAVDR
IQSNTQGGLA FLATVGSISP FVGLFGTVWG IYHALTAIGI SGQASIDKVA GPVGEALLMT
AIGLAVAVPA VLAYNWLVRR NKAVMDEVRA FSSDLHAVVL GSVAKA