| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1118 |
|---|
| Symbol | |
|---|
| ID | 3964356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1202892 |
|---|
| End bp | 1203320 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637915939 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_522390 |
|---|
| Protein GI | 89899919 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATGC ACGTAGGAAA CACAAGCAGC TCGGGTGAGC CCGAGGTGAT GATGGAGATC
AACACCACGC CCCTGATTGA CGTGATGCTG GTTTTATTGG TCATGCTGAT CATCACGATC
CCGATTCAGC TGCACTCGGT CAACCTGGAA ATGCCGGTCG GCGCGCCGCC CACCACTCTG
ATCAAGCCGG AAAAGATACA GATTGACATC GACGAGCAAA GCGTCGTTTA TTGGCAGGGC
TTGCCCGTGA GCGCACAGGA GCTCGATGAG AAGATGAAAG CCGTCGCGCC CCAGCAGCCC
CAGCCCGAAG TCCACATCCG CCCCAACAAA GCCTCGCAGT ACGCTGTCTT TGCCAATGTG
CTCTCCAGCA GCAAGCGCCT GGGTCTCAAC AAAATTGCCG TCATCGGCGC TGAGCAGTTT
GTGCAATGA
|
|---|
| Protein sequence | MGMHVGNTSS SGEPEVMMEI NTTPLIDVML VLLVMLIITI PIQLHSVNLE MPVGAPPTTL
IKPEKIQIDI DEQSVVYWQG LPVSAQELDE KMKAVAPQQP QPEVHIRPNK ASQYAVFANV
LSSSKRLGLN KIAVIGAEQF VQ
|
|---|
| |