| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1108 |
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| Symbol | |
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| ID | 3964346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1188090 |
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| End bp | 1188983 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637915929 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_522380 |
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| Protein GI | 89899909 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0531179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCT CCACCGCCAC CAGGTCGGGC CAACGACGCC CTTACCGGCT GAGCCCGGCG
CGCATTGGCG TCTATGCCTT TTTGCTCACC GCAGCGTTGT TCTTCCTGAT GCCGCTGTAC
ATCATGCTGG TCACCTCGCT CAAAACCATG GACGAGATTC GCCTGGGCAA CATTTTTGCA
CTCCCGATCG CCATCACGGT CGAGCCCTGG GTCACGGCCT GGACCTCGGC CTGCACCGGC
GTCTCGTGTG AGGGCATTCG CGGTGGCTTC TGGAATTCGC TGTTCATCGT GATTCCAAGC
ACCATTCTGC CCATCCTGCT GGGTGCTCTC AATGGCTATG CCTTGTCGTT CTGGCGGCCC
CGTGGCGCGA ATGTTCTGTT CGCCATTCTG ATGATGGGAG CCTTTATTCC GGTGCAGGTG
ATGATGTTCC CGCTGGTGCG TATCCTGGCG ACGCTGGGCT TGTTCAGCTC GCTGCCCGGC
ATTGTCGTGA TTCACATCAT CTTCAGCATG CCGGTGATGA CACTGCTGTT TCGCAACTAT
TACCTGTCGA TTCCACAGGA ACTGTTCAAG GCAGCACGCA TCGACGGCGG TGGATTTTTC
CGCATCTTTA TGCAGTTGAT GTTGCCCATG TCCACGCCGA TCATCATCGT GGCCGCCATC
ATGCAGGTCA CGGGCGTCTG GAACGACTAC ATCCTGGGTC TGGTGTTCGC GGGCCGGGAC
AACCTGCCCA TGACAGTGCA GCTCAACAAC GTGATCAACA CCACCACGGG AACGCGCCTG
TACAACGTCA ACATGGCGGC CACGATTCTG ACCTCGCTGG TGCCACTCAC GATCTATTTT
GTTTCCGGGC GCTGGTTTGT GCGGGGTATC GCCGCCGGTG CGGTAAAAGG GTAA
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| Protein sequence | MKTSTATRSG QRRPYRLSPA RIGVYAFLLT AALFFLMPLY IMLVTSLKTM DEIRLGNIFA
LPIAITVEPW VTAWTSACTG VSCEGIRGGF WNSLFIVIPS TILPILLGAL NGYALSFWRP
RGANVLFAIL MMGAFIPVQV MMFPLVRILA TLGLFSSLPG IVVIHIIFSM PVMTLLFRNY
YLSIPQELFK AARIDGGGFF RIFMQLMLPM STPIIIVAAI MQVTGVWNDY ILGLVFAGRD
NLPMTVQLNN VINTTTGTRL YNVNMAATIL TSLVPLTIYF VSGRWFVRGI AAGAVKG
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