| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1106 |
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| Symbol | |
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| ID | 3963490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1185479 |
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| End bp | 1186945 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915927 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_522378 |
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| Protein GI | 89899907 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0729101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAT GTATGCAACG AGCAGGATCA CCTGTGGTGG TTGCCGTTTT GGTGCTGACC
TGGGGCGTGG CGGTACAGGC GCAGTCCACG GCGGCATCAG GTGGCAAGTT CCGGGGCGAT
GCCGTGCAGA CTTGGGTGAC TCTGACGGAC CAGTCGAAGC TGCTCGCTCC ACAGGAGGGT
GTGATCTTTA GCGGCAAGCT GCCACTGCCG TTGAATATCG ACGTTGACGT CGGCAAGCGC
TACCAGGAGA TCGTCGGCTT TGGCGCCAAC ATTTCAGATG CGTCGGCCTG GTTGATCCAG
AACCGGATGA ACGCGCAGCA GCGACAGGCG CTGATGGCAG ATTTGTTCGG CAAGCCGCCC
GGCATCGGTT TGAGCTTCAC ACGCCTGACT ATCGGTGCTG CTGACTTTTC GCGCAGCCAC
TACACACTCG ATGATGTAGC GGCCGGGCAA ACCGACTACC CTCTGGCAAA GTTTTCCATA
GCCCCCCTGC GCGCCGATGT GCTGCCGGTG GTCAAAAGCG CCCTTGCCAT CAATCCCAAG
TTGCGCGTCA TGGCATCACC CTGGAGCGCA CCGGCCTGGA TGAAGAGCAA TGACAGCCTG
ATCCAGGGCA CGTTGCGCCC GCAGGCCTAC GGTGCATTTT CTCAGTACCT TGAAAAATTT
GCCGATGCGA TGGAAGCCGA GGGCGTGCCC CTGTATGCGC TGACCGTGCA GAACGAACCC
CACTTCGAGC CCAAGGACTA TCCGGGGATG AGACTGGAGT CTGCAGTCCG TGCCAAGCTG
ATCGGCGAGC ACCTGGGGCC CCTGCTGGCC AAGCGTGACA AGCCGGTGCG TATTCTGGAT
TGGGACCATA ACTGGGATGA GCCCCAGGCG CCCCTGCAGG TGCTGGCCGA CCCGCAAGCG
CGTCCTTATG TGGCGGGCGT CGCATGGCAC TGCTATGCCG GCGATGTGGC GGTGCAGTCG
ATGGTGCACG ATGCCCATCC GGACAAGGAA ACCTACCTCA CCGAATGTTC TGGTGGCGAG
TGGAAACCAC ACTGGGGGGA GACCCTCCCG TGGTACATGC GGAACCTGAT CATCGGTACC
ACACGGGGCT GGGCCAAGGG CGTATTGCTG TGGAACATTG CGCTGGACGA AAACCATGGC
CCCCACAATG GCGGCTGTAG CGATTGTCGT GGCGTGGTGA CCATCAACTC CAAGACGGGT
GAGGTGACGC GTAATTTGGA CTACTACGCG CTGGCGCACG CCAGCCGCTT TGTACGACCG
GGCGCGCACC GCATTGAATC TACGACCGGG GTGGATCAGC TGGAGACGGT GGCCTTCCAG
AATGCAGATG ACAACTCGAT CGCCCTGATT GTGTTGAATT CGGCAAGCAA TTCGCGTCGT
TTCTCGGTGC GTCTTGGTGA TCACACTTTC GAGCACACGA TGCCAGGCGC CAGCGTTGCT
ACCTTTGTCT GGCAGGCGCC GCACTGA
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| Protein sequence | MQTCMQRAGS PVVVAVLVLT WGVAVQAQST AASGGKFRGD AVQTWVTLTD QSKLLAPQEG
VIFSGKLPLP LNIDVDVGKR YQEIVGFGAN ISDASAWLIQ NRMNAQQRQA LMADLFGKPP
GIGLSFTRLT IGAADFSRSH YTLDDVAAGQ TDYPLAKFSI APLRADVLPV VKSALAINPK
LRVMASPWSA PAWMKSNDSL IQGTLRPQAY GAFSQYLEKF ADAMEAEGVP LYALTVQNEP
HFEPKDYPGM RLESAVRAKL IGEHLGPLLA KRDKPVRILD WDHNWDEPQA PLQVLADPQA
RPYVAGVAWH CYAGDVAVQS MVHDAHPDKE TYLTECSGGE WKPHWGETLP WYMRNLIIGT
TRGWAKGVLL WNIALDENHG PHNGGCSDCR GVVTINSKTG EVTRNLDYYA LAHASRFVRP
GAHRIESTTG VDQLETVAFQ NADDNSIALI VLNSASNSRR FSVRLGDHTF EHTMPGASVA
TFVWQAPH
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