Gene Rfer_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1105 
Symbol 
ID3963489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1184641 
End bp1185402 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content56% 
IMG OID637915926 
Productphospholipase/carboxylesterase 
Protein accessionYP_522377 
Protein GI89899906 
COG category[R] General function prediction only 
COG ID[COG4099] Predicted peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.320599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGA TCGTGACTAA AATTTTCTCA CTGGTGACTT TAACAACGGT GACGTTTCTT 
CTTGGAGGGT GTGCCATGAG CGAACCATGG ACACTGGCCG AAGGCCAGCA TCCGCAATCG
TTGGAAAAGC AGATGAGCGA TACCGTCGGC ACCCCTTTTT TGCTCTATTT GCCGGAGGGG
TACAACAAGA TCGATGGCAA GAAGTGGCCG CTGATCGTCT TTCTGCACGG CTCCGGCGAG
CGCGGCGACG ATATTGAAAA AGTGAAGGCG CACGGTCCGC CGAAAATGCT CGAGACACAG
AAAGACTTTC CATTCATCGT GGTGTCGCCG CAAGCAGCTG CCCATACGAA CTGGAATAGC
AATAGCCTGA CTGTGTTGCT GGATGAAGTC ATCGCGCGCC TGCCGGTCGA TGTCGACCGG
ATTTATCTGA CTGGTTTGAG CCGCGGTGGT CATGGCACCT GGAAAATGGC AGCCGATCAT
CCCGAGCGAT TTGCCGCAAT CGCGCCGGTC TGCGGCGCCG GCGATGTGAA GAGCGCATGC
CAACTCAAAA ATATTCCGAT ATGGGCTTTT CATGGCGAGA AGGACACGGT CGTCAGCCTC
CAGGATGACG CCGCCATGGT GGCAGCCGTC AAGGCCTGCG GCGGGGATGT GAAATTCACG
GTTTACCCCG GCGTCGGCCA CGACTCCTGG ACGCAGACCT ACGCGAATCC GGCACTGTAT
GAATGGTTTT TGCAGCACAA GCGCAAACCG GTCGAACCCT GA
 
Protein sequence
MDEIVTKIFS LVTLTTVTFL LGGCAMSEPW TLAEGQHPQS LEKQMSDTVG TPFLLYLPEG 
YNKIDGKKWP LIVFLHGSGE RGDDIEKVKA HGPPKMLETQ KDFPFIVVSP QAAAHTNWNS
NSLTVLLDEV IARLPVDVDR IYLTGLSRGG HGTWKMAADH PERFAAIAPV CGAGDVKSAC
QLKNIPIWAF HGEKDTVVSL QDDAAMVAAV KACGGDVKFT VYPGVGHDSW TQTYANPALY
EWFLQHKRKP VEP