| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1104 |
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| Symbol | |
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| ID | 3963488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1183095 |
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| End bp | 1184501 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637915925 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_522376 |
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| Protein GI | 89899905 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0389149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAA GTTTTTTTGA AGTTTGTCTT GAACAAGCAG TGATCACGCT ATGGTCCTTT
GGCAAGCGCG CCGGGCTCAT CACAGTCCAA CTTCTCGCAC TCGCCACATT CAGCAGCACG
CAGGCGGGAA ACACCAACGC AGACTCCTCA TTGGTACCTG CCCATGGCGT GACAAAGGCT
GTCCCCGAGC GGGCGCTTTC GATGCTGCGC ACACAAGGGA CGCAGTGGGT CAAAGCGGAT
GGAGCACCGA TTCAGTTGAA GGGGACCAAC CTGGGCAACT GGCTTATGCT GGAATTTTGG
ATGATGGGCC AGAGCACCAA GGCTATTGAC GACCAGTGCA CGCTGGAAGC GACGCTGGAC
CGGCGCTTTG GCTATGTCGA ACGTGAACGC CTGATGAGAT TGCACCGCGA CAACTGGATC
ACTGCTCGTG ACTGGGACCT GATGCCCCAA TTCGGCCTGA ATCTGGTGCG TGTGCCGTTC
ATCTGGAGTT TGATCGAAGA CGAACAGAAC CCGCGCCATC TTCGACCCGA CGCCTGGCAC
TATCTGGATG AGGCCATCAA CCAGGCTGAA GCCCGCGGCA TGTATGTGGT GCTGGACCTG
CATGGTGCGG TCGGCGCGCA GGGGCATGAG CATCACAGCG GCTGTGCGGG CAAGAACCTC
TACTGGAGCA CACCAGAATA CCAGGAACGT ACGGCCTGGC TGTGGCAGCA AATTGCCAAC
CGCTACAAGA ACCGCGCGGC GGTGGCTGGC TACAGTATCC TCAATGAACC CTGGGGCGCG
AGCGAAGCAG AGATGGCCGC CGTGATGAAA GAACTGTACG CCAGCGTGCG TGCGGTGGAT
CCCAACCACA TCATCATCCT GCCCGGCCAC TCGCGGGGCA TTGATGCCTA TGGCAAACCC
GGCGACCAGG GCATGCGCAA CGTGGCTTTC GAGATGCATT TTTATCCCGG CCACTTTGGC
TGGGCCAAGC CGGGGTTGGA CGTACACCGG GACTGGCTCC AGTGTGTACC CCAAGGCGGA
GGCACCTGCG AATGGAATGC ACGCATGATG GCATGGGATA CACCACTCTT TGTTGGCGAA
TTTCAGCCGT GGGCGGACAT GGATGATGAG CTCGGGGGGC AGATCACCCG CGCCAGCTAC
GATACTTACG CGAAGTATGG CTGGGCAGCG GCCACCTGGT CGTTCAAGAT GCTGAGCAAC
GCCGGCGGGC TGGTCAAAAG TAACTGGGGC ATGGTCACCA ATGTTGAAGG TGCCAACATT
CCGGCAGTCG ATTTTTCCCA AGCCTCGCTC GGTGAAATCG AACAATTGAT CAAGCTATTT
GGCAGCGTTC CTTATCAGCC CAATAGGCAG GTCATGAAGT GGATGAACAG CCTGGTCCCG
CCGAAGCCCT TTGCGCAGGC CCAGTAG
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| Protein sequence | MKASFFEVCL EQAVITLWSF GKRAGLITVQ LLALATFSST QAGNTNADSS LVPAHGVTKA
VPERALSMLR TQGTQWVKAD GAPIQLKGTN LGNWLMLEFW MMGQSTKAID DQCTLEATLD
RRFGYVERER LMRLHRDNWI TARDWDLMPQ FGLNLVRVPF IWSLIEDEQN PRHLRPDAWH
YLDEAINQAE ARGMYVVLDL HGAVGAQGHE HHSGCAGKNL YWSTPEYQER TAWLWQQIAN
RYKNRAAVAG YSILNEPWGA SEAEMAAVMK ELYASVRAVD PNHIIILPGH SRGIDAYGKP
GDQGMRNVAF EMHFYPGHFG WAKPGLDVHR DWLQCVPQGG GTCEWNARMM AWDTPLFVGE
FQPWADMDDE LGGQITRASY DTYAKYGWAA ATWSFKMLSN AGGLVKSNWG MVTNVEGANI
PAVDFSQASL GEIEQLIKLF GSVPYQPNRQ VMKWMNSLVP PKPFAQAQ
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