| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1097 |
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| Symbol | |
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| ID | 3963481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1174624 |
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| End bp | 1175874 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915918 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_522369 |
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| Protein GI | 89899898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000486653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAC TTTCCAAATT GTCTGCAGCC ATTGCATTTG TAGTGGTTGG CGCATCGGCC
CTGGCCGGTG AAGTTGAAGT GCTGCATTGG TGGACATCGG GCGGCGAAGC CAAGTCGGTC
AGCGAATTGA AAAAAATCAT GCAGAGCAAG GGCCACACCT GGAAAGACTT TGCGGTGGCC
GGCGGCGGCG GTGACAACGC CATGACCGTG CTCAAAAGCC GTGTGGTGGC CGGCAACCCG
CCCGCTGCAG CCCAGATCAA AGGCCCTGCG CTTCAAGAAT GGGCCTCTGA AGGGGTGCTG
GCGAATCTGG ATGCCACTGC AAAAGCTGAA AACTGGGACA GCCTGCTGCC CAAGGCGATA
GCAGACGGCA TGAAATACAA AGGGAACTAC ATCGCTGTTC CGGTCAATGT GCACCGCGTC
AACTGGCTGT GGGCCAATGC GGCCGTGTTG AAAAAATCTG GCGTGGCGGG CATGCCCAAA
ACCTGGACTG AATTTTTTGC CGCTACCGAC AAGATCAAGA AGGCGGGATT TATCCCGGTT
GCAACGGGTG GCAATGCCTG GAATGACCTC ACCAACTTTG AGCCTGTGGC GCTCGGTGTC
GGCGGTGTCA AGTTTTACAA CGATGCGTTT GTCAAACTTG ACCCTAAAGC ACTGAACAGC
GATGCCATGA AGAAATCGCT GGAGACCTTT CGCAAGCTCA AAGGCTACAC CGATGCCGGT
GCCGTGGGTC GCGACTGGAA TATCGCCACG GCGATGGTGA TCCAGGAGAA AGCCGGCTTC
CAACTCATGG GCGATTGGGC CAAGGGCGAA TTTGTCGCTG CCGGCAAGGT GCCGGGCAAA
GATTTCCTGT GTGCCGCAGC ACCTGGCAAT GCAGGCACCT ACACCTTTAA CGTGGATTCA
TTCGCCATGT TCAAGCTCAA GGATGCGGCA GCCCAAAAGG CGCAGGCAGA CCTTGCCGTT
GCCATCATGG GCCCTGAATT CCAGGAAGTA TTCAACCTGA ACAAAGGCTC CATCCCGGTT
CGCTTGAACA TGAACATGGA CAAGTTTGAC GAATGCGCCA AGCTGTCGGC CAAGGAATTT
GTTGACACCG CCAAGTCGGG TGGCCTGGTT CCTTCCGTTT CCCAGGATAT GGCGCTCAAG
CCCGCCGCGA CGGGTGCCCT GAAAGATGTC GTCAGCCAGT TCTGGAACGA TGACAAGATG
ACGCCGGAAA CGGCCATGAA GAATATGGTC AAGGCGGCTA CGACCAAATA G
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| Protein sequence | MLKLSKLSAA IAFVVVGASA LAGEVEVLHW WTSGGEAKSV SELKKIMQSK GHTWKDFAVA
GGGGDNAMTV LKSRVVAGNP PAAAQIKGPA LQEWASEGVL ANLDATAKAE NWDSLLPKAI
ADGMKYKGNY IAVPVNVHRV NWLWANAAVL KKSGVAGMPK TWTEFFAATD KIKKAGFIPV
ATGGNAWNDL TNFEPVALGV GGVKFYNDAF VKLDPKALNS DAMKKSLETF RKLKGYTDAG
AVGRDWNIAT AMVIQEKAGF QLMGDWAKGE FVAAGKVPGK DFLCAAAPGN AGTYTFNVDS
FAMFKLKDAA AQKAQADLAV AIMGPEFQEV FNLNKGSIPV RLNMNMDKFD ECAKLSAKEF
VDTAKSGGLV PSVSQDMALK PAATGALKDV VSQFWNDDKM TPETAMKNMV KAATTK
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