Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1094 |
Symbol | |
ID | 3963478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1171457 |
End bp | 1172527 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637915915 |
Product | ABC transporter related |
Protein accession | YP_522366 |
Protein GI | 89899895 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.910142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTT CACTCCACAT CGCAGGTATT CGCAAGGTCT TTGGCAAAGG CGCCAAGGCG GTCGAAGTGC TGAAGAAAAT TGACATCGAC GTCGCACCGG GCGAATTTCT GATTCTGGTC GGGCCCTCTG GTTGCGGCAA ATCGACCCTG CTCAACATCA TTGCCGGACT GGAAGAGCCG ACCGAGGGCG AGCTGCGCAT TGCCGGCAAA AACGTCATCG GCGTGGCCCC GGCCCAGCGC GACATTGCCA TGGTGTTCCA GAGCTATGCG CTCTACCCGA CCATGAGCGT GGCCGACAAC ATTGGCTTTG CGCTGGAAAT GCGCAAGGTA CCCAAGGCGG CGCGCCTCAA GCGCATTCAT GAAGTGGCCG CCATGTTGCA AATTGAGCAA CTGCTGGACC GGCGGCCGGC GCAGCTCTCA GGCGGCCAGC GTCAGCGCGT GGCCATGGGC CGCGCCCTGG CGCGTGATCC GCAACTGTTT TTGTTTGACG AACCTTTGAG TAATCTGGAT GCCAAACTGC GCGTCGAGAT GCGCGCCGAG ATCAAGCGTC TGCACCTGGT CTCAGGCATT ACCAGCGTCT ATGTGACGCA CGACCAGATC GAGGCCATGA CGCTGGGCAG CCGCATTGCT GTCATGAAAG ACGGCATCCT GCAGCAAATT GGCACACCGG ACGACATCTA CCGCCGCCCG GCCAATACCT ACGTGGCCGG TTTCATCGGT TCACCAACTA TGAATTTTAT AGCTGGTCAG GTAGACGGGA CGGGGGCTGA TGCCGTATTT TCCTTTGAAG GTGGGGAGTT GCGGCTACCG TGTCCGACGG TTGGCAAGGT CACACTGGGC CAGCGTCCCG AGCACATTCA CCTCGACCCC GATGCCACCT GGCGCGGTGA AGTGATACTG GTGGAGCCGA CCGGAGCCGA CACGTATGTC GTGGTGAGAA CCGGTGTCGG CTTGATCACG GTGCGCACAC CACCCAGCAC GCAGGTTTTG ATGGGCGACG TTGTGGGTCT GTCTGTCAGC GGCCGGCACA ACAACTGGTT TGACGCGCAG AGCGGCTTGC GTCTGATTTA G
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Protein sequence | MAASLHIAGI RKVFGKGAKA VEVLKKIDID VAPGEFLILV GPSGCGKSTL LNIIAGLEEP TEGELRIAGK NVIGVAPAQR DIAMVFQSYA LYPTMSVADN IGFALEMRKV PKAARLKRIH EVAAMLQIEQ LLDRRPAQLS GGQRQRVAMG RALARDPQLF LFDEPLSNLD AKLRVEMRAE IKRLHLVSGI TSVYVTHDQI EAMTLGSRIA VMKDGILQQI GTPDDIYRRP ANTYVAGFIG SPTMNFIAGQ VDGTGADAVF SFEGGELRLP CPTVGKVTLG QRPEHIHLDP DATWRGEVIL VEPTGADTYV VVRTGVGLIT VRTPPSTQVL MGDVVGLSVS GRHNNWFDAQ SGLRLI
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