Gene Rfer_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1094 
Symbol 
ID3963478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1171457 
End bp1172527 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content60% 
IMG OID637915915 
ProductABC transporter related 
Protein accessionYP_522366 
Protein GI89899895 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.910142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTT CACTCCACAT CGCAGGTATT CGCAAGGTCT TTGGCAAAGG CGCCAAGGCG 
GTCGAAGTGC TGAAGAAAAT TGACATCGAC GTCGCACCGG GCGAATTTCT GATTCTGGTC
GGGCCCTCTG GTTGCGGCAA ATCGACCCTG CTCAACATCA TTGCCGGACT GGAAGAGCCG
ACCGAGGGCG AGCTGCGCAT TGCCGGCAAA AACGTCATCG GCGTGGCCCC GGCCCAGCGC
GACATTGCCA TGGTGTTCCA GAGCTATGCG CTCTACCCGA CCATGAGCGT GGCCGACAAC
ATTGGCTTTG CGCTGGAAAT GCGCAAGGTA CCCAAGGCGG CGCGCCTCAA GCGCATTCAT
GAAGTGGCCG CCATGTTGCA AATTGAGCAA CTGCTGGACC GGCGGCCGGC GCAGCTCTCA
GGCGGCCAGC GTCAGCGCGT GGCCATGGGC CGCGCCCTGG CGCGTGATCC GCAACTGTTT
TTGTTTGACG AACCTTTGAG TAATCTGGAT GCCAAACTGC GCGTCGAGAT GCGCGCCGAG
ATCAAGCGTC TGCACCTGGT CTCAGGCATT ACCAGCGTCT ATGTGACGCA CGACCAGATC
GAGGCCATGA CGCTGGGCAG CCGCATTGCT GTCATGAAAG ACGGCATCCT GCAGCAAATT
GGCACACCGG ACGACATCTA CCGCCGCCCG GCCAATACCT ACGTGGCCGG TTTCATCGGT
TCACCAACTA TGAATTTTAT AGCTGGTCAG GTAGACGGGA CGGGGGCTGA TGCCGTATTT
TCCTTTGAAG GTGGGGAGTT GCGGCTACCG TGTCCGACGG TTGGCAAGGT CACACTGGGC
CAGCGTCCCG AGCACATTCA CCTCGACCCC GATGCCACCT GGCGCGGTGA AGTGATACTG
GTGGAGCCGA CCGGAGCCGA CACGTATGTC GTGGTGAGAA CCGGTGTCGG CTTGATCACG
GTGCGCACAC CACCCAGCAC GCAGGTTTTG ATGGGCGACG TTGTGGGTCT GTCTGTCAGC
GGCCGGCACA ACAACTGGTT TGACGCGCAG AGCGGCTTGC GTCTGATTTA G
 
Protein sequence
MAASLHIAGI RKVFGKGAKA VEVLKKIDID VAPGEFLILV GPSGCGKSTL LNIIAGLEEP 
TEGELRIAGK NVIGVAPAQR DIAMVFQSYA LYPTMSVADN IGFALEMRKV PKAARLKRIH
EVAAMLQIEQ LLDRRPAQLS GGQRQRVAMG RALARDPQLF LFDEPLSNLD AKLRVEMRAE
IKRLHLVSGI TSVYVTHDQI EAMTLGSRIA VMKDGILQQI GTPDDIYRRP ANTYVAGFIG
SPTMNFIAGQ VDGTGADAVF SFEGGELRLP CPTVGKVTLG QRPEHIHLDP DATWRGEVIL
VEPTGADTYV VVRTGVGLIT VRTPPSTQVL MGDVVGLSVS GRHNNWFDAQ SGLRLI