Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1084 |
Symbol | |
ID | 3963507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1158783 |
End bp | 1160201 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637915905 |
Product | L-serine dehydratase 1 |
Protein accession | YP_522356 |
Protein GI | 89899885 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATCA GCGTTTTTGA TCTCTTCAAG ATTGGTATCG GACCGAGCAG CTCGCACACG GTGGGGCCGA TGCGCGCGGC GCGCCTGTTT GCCCAGACGC TGGAGCGCGA GCACTGGCTC GACGCCACCC AGGGCGTGAC CTGCGAGCTG TATGGCTCAT TGGGTGCCAC CGGCAAAGGC CACGGCTCCG ATGTGGCGGT CATGCTCGGC TTGATGGGCC ACGCGCCCGA CACGGTGGAC GTGGCTGCGG TATCCGGCCT GATCCAGACC GTGCGTGCCC AGCAGACGCT GGCGCTGCTG GGCGTCAAAC CCATTGTGTT CAAGGAAAAA GAGCACGTGC TGATGTACCG CCGCGAGGCC CTGGCCGAGC ATCCCAACGG CATGAAGTTC AGTGCGGTGG ACGCGCAGGG CCAGTTGCTC CGGCAAGCCA AGTACCTCAG CGTCGGCGGC GGTTTTGTGG TCACCGCTGG CAGCTCCAAT GAGGCCGTGC TGAGCGAGTA CCAGAAAGTG CCTTACCCCT TCACCTCGGG CGCTGAACTG CTGGCGACTT GCCAGCAGCA GCGCTTGAGC ATTGGCGAGT TGATGTGGGC CAACGAGCGC ACCTGGCGCA GCGATGATGA AATTCGTGCC GGTTTGCTCA ACATCTGGCG CGTCATGCGC GAATGCGTGC AACGCGGCCT GAGCGCGCAG GGCCTGCTAC CCGGTCCGTT CAAGGTGCAG CGCCGTGCCC CGGTGCTGGC GGCCCAGTTG CGCGAGCGTG CCGAGCAAGC GCTGGCCGAT CCGTTGTCGG TGCTGGACTG GGTCAATGTC TATGCCTTTG CCGTGAATGA AGAAAACGCC GCCGGCGGGC GCGTGGTGAC TGCGCCGACC AACGGCGCGG CCGGGGTCAT TCCGGCGGTG CTGCACTACT GCGACCGCTT TGTGCTGAGC CAGCACGCAC GCACAGCGCA GACCGACGCC ACCGGGCACA ACAGCGCCGA CGACGCGGTG ATCAATTTCC TGATGAGTGC GGCGGCCATC GGCATGTTGT ACAAGCTCAA TGCCTCCATC AGCGGCGCCG AAGTGGGTTG CCAGGGCGAG GTTGGCGTGG CCTGCTCGAT GGCCGCCGCC GGCTTGACCG CGGTGATGGG CGGCAGCCCC GAGCAGATTG AAAACGCCGC CGAGATCGGC ATGGAGCACA ACCTGGGCCT GACCTGCGAC CCCATCGGCG GCCTGGTGCA GGTGCCCTGC ATTGAACGCA ACGCCATGGG CGCGGTCAAG GCTGTGAACG CGGCGCGCAT GGCGCTGGCG GGCAACGGCC AGCACGTGGT GTCGCTCGAC AAGGTGATCA AGACCATGCG CGAGACCGGC GCCGACATGA AAACCAAATA CAAGGAAACC TCGCGCGGCG GCTTGGCGGT CAATATTGTG GAATGTTAG
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Protein sequence | MAISVFDLFK IGIGPSSSHT VGPMRAARLF AQTLEREHWL DATQGVTCEL YGSLGATGKG HGSDVAVMLG LMGHAPDTVD VAAVSGLIQT VRAQQTLALL GVKPIVFKEK EHVLMYRREA LAEHPNGMKF SAVDAQGQLL RQAKYLSVGG GFVVTAGSSN EAVLSEYQKV PYPFTSGAEL LATCQQQRLS IGELMWANER TWRSDDEIRA GLLNIWRVMR ECVQRGLSAQ GLLPGPFKVQ RRAPVLAAQL RERAEQALAD PLSVLDWVNV YAFAVNEENA AGGRVVTAPT NGAAGVIPAV LHYCDRFVLS QHARTAQTDA TGHNSADDAV INFLMSAAAI GMLYKLNASI SGAEVGCQGE VGVACSMAAA GLTAVMGGSP EQIENAAEIG MEHNLGLTCD PIGGLVQVPC IERNAMGAVK AVNAARMALA GNGQHVVSLD KVIKTMRETG ADMKTKYKET SRGGLAVNIV EC
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