| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1062 |
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| Symbol | |
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| ID | 3963758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1131262 |
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| End bp | 1134678 |
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| Gene Length | 3417 bp |
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| Protein Length | 1138 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637915883 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_522334 |
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| Protein GI | 89899863 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATT TCGCCTTCCT CCAGTCTGAA TGGTCCACCC TGTACGGAGC GGCCATCAAG
GCTGAAGGAA TGGCGAACAC GGATGCCCGC ACCTCCTGCT TTTACGCCCG GCGCACGTTG
GAGCTGGCGG TGGATTGGCT CTACAAGCAT GACCCTGCAC TGCGCCTGCC GTACCAGGAC
CATCTGAGTG CCCTGATTCA CGAACCCAGC TTCAAGGCCA CGGCGGGTGA CGCGGTATTC
ACCAAGGCCA AGCTCATCAA AGACCTCGGC AATCTGGCCG TGCACAGCAC CCGCAAAATT
CTGCCGGTGG ATGCCGTCAC CGCCACCCGC GAACTGTTTC ACTTTTGCTA CTGGCTGGCA
CGCACCTATG GTCAGAGGGC CAGACCTGCT CCCGACCTGC GCTTTGTTCC AGCGCTGATT
CCATCGGCAT CTGCAACGGC AACTGTGCCT GACCCTGCAC CACAGTCAGT TGACCAACTC
CAGAAGCTTG AAGCCGAACT GCAAGCCCGT GACGAAAAAC TCACTGTGCT GCTGTCTAAC
AAGGCCGCGC TGGACGACGA ACTCAAACAA TTGCGGGAGC AAGTGGCCGC CGCCAAGAAA
GCCAACACGG CCCAGCCAGA CACGCATGAC TACTGTGAGA CCGAAACCCG CGACAAATTC
ATTGACCTGT TGCTCAAAGA GGCTGGCTGG CAACTCAATG CCAAGAACTT CGAGATTGAA
GTCAGCGGCA TGCCCAACAA CCAAGGCGTT GGCTACGTGG ATTACGTCTT GTGGGGCGAC
GATGGCAGGC CGCTGGGGCT GGTGGAGGCC AAGCGCACCC GCCGGGATGC CAAGGTGGGC
CAGCAGCAGG CCAAGCTGTA TGCCGACTGC CTGCAAGCCC AATACGACCA GCGGCCCATC
ATCTTCTATT CCAATGGCTA CGAGCATTGG ATTTGGGACG ACGCCAGCTA TCCGCCACGC
CCGGTTCAGG GCTTTTTCAA GAAGCAGGAA TTGGAGCTGT TGATTCAACG CCGCACCAAC
CGCAAGAAAC TGGCCGATGC GGTCATCAAC GACGACATCG TCAACCGCTA TTACCAGCAC
CGTGCCGTGC GCCGTATTGG TGAAACCTTT GAATTGGAAA ACCAGCGCAA GGCCTTGCTG
GTGATGGCCA CCGGTGGCGG CAAGACCCGA GTTGTGGTGG CGCTGTCCGA TGTGCTGACG
CGCTGCAACT GGGCCAAGCG CATCCTGTTT CTGGCCGACC GGGTGGCACT GGTCAAACAG
GCGGTCAACG CGTTCAAGAC GCACCTGCCG GACTCGTCAC CGGTCAATCT GGTGTCGGAG
AGGCACGCCG ATGGCCGGGT GTTTGTCTCG ACTTACCCCA CGATGATGGG GCTGATTGAC
GATGCGGCTG ACGGCCAGCG CCGTTTTGGC GTTGGGCACT TCGACCTCAT CATCATCGAC
GAGGCACACC GCTCGGTGTA CCAGAAGTAC CGCGCCATCT TTGATTACTT TGACGCCATG
CTGGTGGGCC TGACCGCCAC GCCCAAAGAC GAGATTGACC ACAACACCTA CAGCCTGTTT
GACCTGGAGA GTGGCGTCCC CACCGATGTA TATGGCCTGG ATGAAGCTGT GGCAGAGGGC
TATCTGGTGC CACCCAGATC CATTTCAGTG CCGCTCAAGT TTCAGCGCGA GGGCATCAAG
TACAAAGACC TGTCAGAAGA AGAAAAAGAG CAGTGGGATG CGCTGGAGTG GGATGAAGAC
GGCAACGTGC CCGATGCGGT GGACTCGGCC GCCCTGAACA AGTGGCTGTT CAACACCGAC
ACCGTGGACA AGGTGCTGGA AAACCTGATG AGCCAGGGTG AAAAAGTGGC CGGTGGCGAC
CGCCTGGGTA AAACCATCAT CTTTGCCAAG AACAATGCCC ATGCCGACTT CATTGCAGAC
CGCTTCAATG TCAATTACCC ACATTACAAG GGGGCGTTCG CCCGTGTGGT GACGTACAAG
ACCGAGTACG CACAGAGCCT GATTGACGAG TTCTCCATGA AGGAGGGCAT GCCGCACATC
GCCATTTCGG TGGACATGCT CGACACCGGC ATTGATGTGC CGGAGGTGGT CAATCTGGTG
TTCTTCAAAA TCATCCGCTC CAAGACCAAG TTCTGGCAGA TGATTGGCCG AGGCACGCGC
TTGTGCCTCG ACTTGTATGG TCCGGGACAG AACAAACAAT TTTTCAATGT CTTCGACTAT
TGCCAGAACC TGGAGTTTTT CAGCTTGGAG CTGCCGCCGG ACGAGGGCAA AAACCCTGTG
CCGCTGAGCA CCCGCCTGTT CCGGGCGCGG CTGGAGATGA TTGCCGAGCT GGACAAGCGG
ATGGCTGCGG GCGACCATGG GGCAACGGCC CAAGACGCAG GTAGTGACGA CCTGACCGAT
GGGCAGTTGC GTGGTGAGCT GGCTGGCTTT CTGCACCAGC AGGTCGCGGC CATGAACCTG
GACAACTTTG TAGTGCGGCC CCGGCGCAAG TCGGTGGAGC GGTTTGCCAA GCGGGATTCG
TGGCATTCGC TTGATGCGGA TGCACATACC GAGTTGAGCC ATGAGGTGGC GGACCTGCCC
ACAGCCTTGT TGGACAACGA CGAAGAAGCC AAACGCTTTG ACATGCTGGT GCTGCGCACC
CAGTTGTCCA TCCTGAAAGC ATCCACTGAC TTTGCAACCC TGCGCGAGCG GATGCAGGCC
ATCGCCAGCG CCCTGGAAGA ACAGGAGGCC ATCCCGGCCA TCAAGGCGCA GATGGTGCTG
ATTCAGTCGG TGGCCAGTGA TGAATGGTGG GAAGACGTGA CCGTGGCCAT GCTGGAGGCG
GCACGCAAGA AACTGCGCGC CCTGGTCAAG CTGATTGAAA AGGGCAAGAA GAACATCGTC
TACACCGACT TTGAAGACGA ATTGGGTACA GGCACGACGA TTATGCTGCC GGGAGTGAGC
ACCGGCATGA ATCTGGCCAA GTTCAAGGAC AAGGCGCGCC AGTTCCTGCG TGCGCATGAA
AGCCACCTGT CGCTGCAACG GCTGCGGCGC AACCAGCCGC TGACGCCGTC CGACCTGATT
GAGCTGGAGC GGATGCTGGT GGAGGCCGGT GGCTCCACGG AAGTCATTGA GCAAGCCAAG
GAGCAAAGCC ACGGTCTGGG CATCTTTATC CGCTCGCTGG TAGGGCTAGA CCGGGAAACG
GCTAAGCTGG CCTTTAGCCA GTTTGTGGTG GGCACCACGG CCACGGCGAG CCAGTTGGAG
TTCATCAACC TCATCGTCGA GGAACTCACT GAAAACGGGG TGATGGACCC GGCGCGGCTT
TATGACTCGC CGTTTACCGA CATCAACCCG CAAGGGCCGG AGGCGTTGTT TCTGCCCGCC
AGGGTGACCG AGATGGTGCG GGTGCTGGAG GAGATTCGGG AACGGGCGGT GGCGTGA
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| Protein sequence | MSNFAFLQSE WSTLYGAAIK AEGMANTDAR TSCFYARRTL ELAVDWLYKH DPALRLPYQD
HLSALIHEPS FKATAGDAVF TKAKLIKDLG NLAVHSTRKI LPVDAVTATR ELFHFCYWLA
RTYGQRARPA PDLRFVPALI PSASATATVP DPAPQSVDQL QKLEAELQAR DEKLTVLLSN
KAALDDELKQ LREQVAAAKK ANTAQPDTHD YCETETRDKF IDLLLKEAGW QLNAKNFEIE
VSGMPNNQGV GYVDYVLWGD DGRPLGLVEA KRTRRDAKVG QQQAKLYADC LQAQYDQRPI
IFYSNGYEHW IWDDASYPPR PVQGFFKKQE LELLIQRRTN RKKLADAVIN DDIVNRYYQH
RAVRRIGETF ELENQRKALL VMATGGGKTR VVVALSDVLT RCNWAKRILF LADRVALVKQ
AVNAFKTHLP DSSPVNLVSE RHADGRVFVS TYPTMMGLID DAADGQRRFG VGHFDLIIID
EAHRSVYQKY RAIFDYFDAM LVGLTATPKD EIDHNTYSLF DLESGVPTDV YGLDEAVAEG
YLVPPRSISV PLKFQREGIK YKDLSEEEKE QWDALEWDED GNVPDAVDSA ALNKWLFNTD
TVDKVLENLM SQGEKVAGGD RLGKTIIFAK NNAHADFIAD RFNVNYPHYK GAFARVVTYK
TEYAQSLIDE FSMKEGMPHI AISVDMLDTG IDVPEVVNLV FFKIIRSKTK FWQMIGRGTR
LCLDLYGPGQ NKQFFNVFDY CQNLEFFSLE LPPDEGKNPV PLSTRLFRAR LEMIAELDKR
MAAGDHGATA QDAGSDDLTD GQLRGELAGF LHQQVAAMNL DNFVVRPRRK SVERFAKRDS
WHSLDADAHT ELSHEVADLP TALLDNDEEA KRFDMLVLRT QLSILKASTD FATLRERMQA
IASALEEQEA IPAIKAQMVL IQSVASDEWW EDVTVAMLEA ARKKLRALVK LIEKGKKNIV
YTDFEDELGT GTTIMLPGVS TGMNLAKFKD KARQFLRAHE SHLSLQRLRR NQPLTPSDLI
ELERMLVEAG GSTEVIEQAK EQSHGLGIFI RSLVGLDRET AKLAFSQFVV GTTATASQLE
FINLIVEELT ENGVMDPARL YDSPFTDINP QGPEALFLPA RVTEMVRVLE EIRERAVA
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